RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 LAG3P18627 525 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 NDUFV1P49821 464 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 GPC3P51654 580 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 PLCB3Q01970 1234 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 TBC1D8BQ0IIM8 1120 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 NPY5RQ15761 445 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 UGCGQ16739 394 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 TRMT1LQ7Z2T5 733 aaKnown RBP17.37■□□□□ 0.37
SMAD5-205ENST00000509297 ADGRD2Q7Z7M1 963 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 BLIDQ8IZY5 108 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 SMRP1Q8NCR6 262 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 PPP1R16BQ96T49 567 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 CDCA3Q99618 268 aaPredicted RBP17.37■□□□□ 0.37
SMAD5-205ENST00000509297 CWH43Q9H720 699 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 TLR9Q9NR96 1032 aa17.37■□□□□ 0.37
SMAD5-205ENST00000509297 ZSCAN20P17040 1043 aaPredicted RBP17.36■□□□□ 0.37
SMAD5-205ENST00000509297 NRIP1P48552 1158 aa17.36■□□□□ 0.37
SMAD5-205ENST00000509297 CLUL1Q15846 466 aa17.36■□□□□ 0.37
SMAD5-205ENST00000509297 XKR3Q5GH77 459 aa17.36■□□□□ 0.37
SMAD5-205ENST00000509297 SPOUT1Q5T280 376 aaKnown RBP17.36■□□□□ 0.37
SMAD5-205ENST00000509297 LRRC71Q8N4P6 559 aa17.36■□□□□ 0.37
SMAD5-205ENST00000509297 COLGALT1Q8NBJ5 622 aa17.36■□□□□ 0.37
SMAD5-205ENST00000509297 ETNPPLQ8TBG4 499 aa17.36■□□□□ 0.37
SMAD5-205ENST00000509297 RSPH1Q8WYR4 309 aa17.36■□□□□ 0.37
SMAD5-205ENST00000509297 TLE6Q9H808 572 aa17.36■□□□□ 0.37
SMAD5-205ENST00000509297 IGKV6-21A0A0C4DH24 114 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 A0A0U1RQF3 1178 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 FSCN2O14926 492 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 CHMP2AO43633 222 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 STBD1O95210 358 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 GLP2RO95838 553 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 EOMESO95936 686 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 FGFR1P11362 822 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 MIER3Q7Z3K6 550 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 ECHDC2Q86YB7 292 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 THNSL1Q8IYQ7 743 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 LRRC43Q8N309 656 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 CASD1Q96PB1 797 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 TRAIPQ9BWF2 469 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 RNF19AQ9NV58 838 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 WDR81Q562E7 1941 aa17.35■□□□□ 0.37
SMAD5-205ENST00000509297 CDKL5O76039 1030 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 CSPG5O95196 566 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 TDP2O95551 362 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 IBSPP21815 317 aaPredicted RBP17.34■□□□□ 0.37
SMAD5-205ENST00000509297 PPM1AP35813 382 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 NONOQ15233 471 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMAD5-205ENST00000509297 DUSP6Q16828 381 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 HERC4Q5GLZ8 1057 aaPredicted RBP17.34■□□□□ 0.37
SMAD5-205ENST00000509297 TMEM184AQ6ZMB5 413 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 KRT25Q7Z3Z0 450 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 ZNF598Q86UK7 904 aaKnown RBP17.34■□□□□ 0.37
SMAD5-205ENST00000509297 MICAL1Q8TDZ2 1067 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 MRPS27Q92552 414 aaKnown RBP17.34■□□□□ 0.37
SMAD5-205ENST00000509297 CHST12Q9NRB3 414 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 DACT1Q9NYF0 836 aa17.34■□□□□ 0.37
SMAD5-205ENST00000509297 PUF60Q9UHX1 559 aaKnown RBP17.34■□□□□ 0.37
SMAD5-205ENST00000509297 PLXNA4Q9HCM2 1894 aa17.33■□□□□ 0.37
SMAD5-205ENST00000509297 STK36Q9NRP7 1315 aa17.33■□□□□ 0.36
SMAD5-205ENST00000509297 DNM2P50570 870 aa17.33■□□□□ 0.36
SMAD5-205ENST00000509297 ERVFC1P60507 584 aa17.33■□□□□ 0.36
SMAD5-205ENST00000509297 LRRC55Q6ZSA7 311 aa17.33■□□□□ 0.36
SMAD5-205ENST00000509297 RBM23Q86U06 439 aaKnown RBP17.33■□□□□ 0.36
SMAD5-205ENST00000509297 ABI1Q8IZP0 508 aa17.33■□□□□ 0.36
SMAD5-205ENST00000509297 GJA10Q969M2 543 aa17.33■□□□□ 0.36
SMAD5-205ENST00000509297 JPH2Q9BR39 696 aaPredicted RBP17.33■□□□□ 0.36
SMAD5-205ENST00000509297 GCOM2Q9BZD3 368 aaPredicted RBP17.33■□□□□ 0.36
SMAD5-205ENST00000509297 NGRNQ9NPE2 291 aaKnown RBP17.33■□□□□ 0.36
SMAD5-205ENST00000509297 PDRG1Q9NUG6 133 aa17.33■□□□□ 0.36
SMAD5-205ENST00000509297 HCSTQ9UBK5 93 aa17.33■□□□□ 0.36
SMAD5-205ENST00000509297 SEPT9Q9UHD8 586 aaPredicted RBP17.33■□□□□ 0.36
SMAD5-205ENST00000509297 DDX25Q9UHL0 483 aaKnown RBP17.33■□□□□ 0.36
SMAD5-205ENST00000509297 MAFO75444 373 aaPredicted RBP17.32■□□□□ 0.36
SMAD5-205ENST00000509297 GCFC2P16383 781 aaKnown RBP17.32■□□□□ 0.36
SMAD5-205ENST00000509297 PPP2R5CQ13362 524 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 KCNC3Q14003 757 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 CBX2Q14781 532 aaPredicted RBP17.32■□□□□ 0.36
SMAD5-205ENST00000509297 PPP4R3AQ6IN85 833 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 KCNT2Q6UVM3 1135 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 ZNF410Q86VK4 478 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 NLRP7Q8WX94 980 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 FAM20AQ96MK3 541 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 ZNF558Q96NG5 402 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 SCLT1Q96NL6 688 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 PHF20Q9BVI0 1012 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 MRPL9Q9BYD2 267 aaKnown RBP17.32■□□□□ 0.36
SMAD5-205ENST00000509297 KCNMB3Q9NPA1 279 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 PPME1Q9Y570 386 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 PCDHGC5Q9Y5F6 944 aa17.32■□□□□ 0.36
SMAD5-205ENST00000509297 CARNS1A5YM72 827 aa17.31■□□□□ 0.36
SMAD5-205ENST00000509297 LOC730098B7Z3J9 87 aa17.31■□□□□ 0.36
SMAD5-205ENST00000509297 DKC1O60832 514 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMAD5-205ENST00000509297 SRGAP2BP0DMP2 458 aa17.31■□□□□ 0.36
SMAD5-205ENST00000509297 ATF7P17544 494 aaPredicted RBP17.31■□□□□ 0.36
SMAD5-205ENST00000509297 HOXD11P31277 338 aaPredicted RBP17.31■□□□□ 0.36
SMAD5-205ENST00000509297 PSMC5P62195 406 aa17.31■□□□□ 0.36
SMAD5-205ENST00000509297 KRT17Q04695 432 aa17.31■□□□□ 0.36
SMAD5-205ENST00000509297 DRP2Q13474 957 aa17.31■□□□□ 0.36
SMAD5-205ENST00000509297 MTERF2Q49AM1 385 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms