RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 FAM20AQ96MK3 541 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 JPH2Q9BR39 696 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 PHF20Q9BVI0 1012 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 NIFKQ9BYG3 293 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 GCOM2Q9BZD3 368 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 TMEM161AQ9NX61 479 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 RALGAPA2Q2PPJ7 1873 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 NLRC5Q86WI3 1866 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 STK36Q9NRP7 1315 aa11.34□□□□□ -0.59
UBE2D3-227ENST00000508818 MYO7AQ13402 2215 aa11.33□□□□□ -0.59
UBE2D3-227ENST00000508818 LOXHD1Q8IVV2 1947 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 C9IYK1 514 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 M0R2N6 131 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 ITGB1P05556 798 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 LINC00271P0C7V0 271 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 IL9P15248 144 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 GCFC2P16383 781 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 COL9A1P20849 921 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 AK2P54819 239 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 PSMC5P62195 406 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 FAM189BP81408 668 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 TRIM29Q14134 588 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 PIK3AP1Q6ZUJ8 805 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 THNSL1Q8IYQ7 743 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 GJD3Q8N144 294 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 SPPL3Q8TCT6 385 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 KIF12Q96FN5 646 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 MBOAT7Q96N66 472 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 ADAMTS10Q9H324 1103 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 ELAC1Q9H777 363 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 TYW1Q9NV66 732 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 DACT1Q9NYF0 836 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 PUF60Q9UHX1 559 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 VCANP13611 3396 aa11.33□□□□□ -0.6
UBE2D3-227ENST00000508818 FGFR1P11362 822 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 DARSP14868 501 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 LAG3P18627 525 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 KRT2P35908 639 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 QARSP47897 775 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 NDUFV1P49821 464 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 GPC3P51654 580 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 NEK4P51957 841 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 UBE3AQ05086 875 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 HYAL1Q12794 435 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 DSC3Q14574 896 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 NPY5RQ15761 445 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 CLUL1Q15846 466 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 PPP4R3AQ6IN85 833 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 RHPN2Q8IUC4 686 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 FAM178BQ8IXR5 827 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 EXOC8Q8IYI6 725 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 LINC01465Q8N7H1 131 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 NECAB1Q8N987 351 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 ETNPPLQ8TBG4 499 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 INO80BQ9C086 356 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 TMEM117Q9H0C3 514 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 EPHX3Q9H6B9 360 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 TLE6Q9H808 572 aa11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 SUCLA2Q9P2R7 463 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-227ENST00000508818 TBX3O15119 743 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 SLC37A4O43826 429 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 DTNBO60941 627 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 MAFO75444 373 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 CENPBP07199 599 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 P4HBP07237 508 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 SFPQP23246 707 aaKnown RBP eCLIP11.31□□□□□ -0.63e-6■□□□□ 10.5
UBE2D3-227ENST00000508818 NUBP1P53384 320 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 PPP2R5CQ13362 524 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 TARBP2Q15633 366 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 ASTLQ6HA08 431 aaPredicted RBP11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 OTUD6AQ7L8S5 288 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 RBM23Q86U06 439 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 SLFN12Q8IYM2 578 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 SLC7A3Q8WY07 619 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 SH2D3AQ9BRG2 576 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 CHST12Q9NRB3 414 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 GJB4Q9NTQ9 266 aa11.31□□□□□ -0.6
UBE2D3-227ENST00000508818 A0A087WZ62 844 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 EML1O00423 815 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 FGF18O76093 207 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 EOMESO95936 686 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 ALADP13716 330 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 FGFR4P22455 802 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 DNAJB1P25685 340 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.67e-7■■■□□ 15.7
UBE2D3-227ENST00000508818 NRIP1P48552 1158 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 POLGP54098 1239 aaPredicted RBP11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 KRT17Q04695 432 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 ADAM15Q13444 863 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 CAMK1Q14012 370 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 COL19A1Q14993 1142 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 EPHA7Q15375 998 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 TMEM31Q5JXX7 168 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 TWF2Q6IBS0 349 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms