RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 SDSP20132 328 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 FPR2P25090 351 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 DDIT3P35638 169 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 STK3Q13188 491 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 BIRC3Q13489 604 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 STAT4Q14765 748 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 SAFBQ15424 915 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 CCDC92Q53HC0 331 aaPredicted RBP5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 FOXB2Q5VYV0 432 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 RNF219Q5W0B1 726 aaPredicted RBP5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 CYB5RLQ6IPT4 315 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 POMZP3Q6PJE2 187 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 MAATS1Q7Z4T9 603 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 FAM126BQ8IXS8 530 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 CRACR2BQ8N4Y2 399 aaPredicted RBP5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 NKAPQ8N5F7 415 aaKnown RBP5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 LEO1Q8WVC0 666 aaPredicted RBP5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 ZNF669Q96BR6 464 aaPredicted RBP5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 NELL2Q99435 816 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 CENPOQ9BU64 300 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 SPATA9Q9BWV2 254 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 DEF6Q9H4E7 631 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 L2HGDHQ9H9P8 463 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 RIC8AQ9NPQ8 531 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 CYP26B1Q9NR63 512 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 TSC22D4Q9Y3Q8 395 aa5.15□□□□□ -1.59
SMARCA5-202ENST00000508573 ABHD14A-ACY1A0A1B0GW23 586 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 C9orf118A6NHY6 69 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 B4GALT4O60513 344 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 MTA2O94776 668 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 CPEP16870 476 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 TACR2P21452 398 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 BCL6P41182 706 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 EIF5P55010 431 aaKnown RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 RPL11P62913 178 aaKnown RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 GBX1Q14549 363 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 CR1LQ2VPA4 569 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 SPECC1Q5M775 1068 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 WDR45BQ5MNZ6 344 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 GTF2IRD2BQ6EKJ0 949 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 IQCEQ6IPM2 695 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 ZNF585AQ6P3V2 769 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 C6orf15Q6UXA7 325 aaPredicted RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 EEPD1Q7L9B9 569 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 GTF2IRD2Q86UP8 949 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 LRRTM3Q86VH5 581 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 Q8N1X5 172 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 MSL3Q8N5Y2 521 aaKnown RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 ZBTB38Q8NAP3 1195 aaPredicted RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 FRS2Q8WU20 508 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 NELL1Q92832 810 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 ZSWIM3Q96MP5 696 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 EIF2AK1Q9BQI3 630 aaKnown RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 LGR4Q9BXB1 951 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 KLC2Q9H0B6 622 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 PUS7LQ9H0K6 701 aaKnown RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 TMEM168Q9H0V1 697 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 CSRNP2Q9H175 543 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 NCOA5Q9HCD5 579 aaKnown RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 KMT5AQ9NQR1 393 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 KLHL11Q9NVR0 708 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 DDX20Q9UHI6 824 aaKnown RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 CROTQ9UKG9 612 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 ZBTB21Q9ULJ3 1066 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 ISY1Q9ULR0 285 aaKnown RBP5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 ZDHHC9Q9Y397 364 aa5.14□□□□□ -1.59
SMARCA5-202ENST00000508573 PMM2O15305 246 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 SLC6A11P48066 632 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 MLLT6P55198 1093 aaPredicted RBP5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 PPP2CBP62714 309 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 PPP2CAP67775 309 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 NUCB1Q02818 461 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 ADAM9Q13443 819 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 CDSNQ15517 529 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 TAF11Q15544 211 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 ELF2Q15723 593 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 LONRF2Q1L5Z9 754 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 TUBB8Q3ZCM7 444 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 MINDY4Q4G0A6 757 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 FAM133BQ5BKY9 247 aaKnown RBP5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 MROH9Q5TGP6 573 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 SYDE2Q5VT97 1194 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 TSHZ3Q63HK5 1081 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 XRRA1Q6P2D8 792 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 PLEKHH3Q7Z736 793 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 FAM178BQ8IXR5 827 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 PALM2Q8IXS6 379 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 CNTD1Q8N815 330 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 COG1Q8WTW3 980 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 CHAMP1Q96JM3 812 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 DDX21Q9NR30 783 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 SPEF1Q9Y4P9 236 aa5.13□□□□□ -1.59
SMARCA5-202ENST00000508573 OVOL3O00110 214 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 ARNTLO00327 626 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 PLD2O14939 933 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 IGHDP01880 384 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 SLPIP03973 132 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 ZNF28P17035 718 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 RXRGP48443 463 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 CLK1P49759 484 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms