RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PHOSPHO2Q8TCD6 241 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 SLC9A7Q96T83 725 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 FTHL17Q9BXU8 183 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 GCOM2Q9BZD3 368 aaPredicted RBP16.69■□□□□ 0.26
RNF4-210ENST00000508235 INO80BQ9C086 356 aaPredicted RBP16.69■□□□□ 0.26
RNF4-210ENST00000508235 CCSER1Q9C0I3 900 aa16.69■□□□□ 0.26
RNF4-210ENST00000508235 TFIP11Q9UBB9 837 aaKnown RBP16.69■□□□□ 0.26
RNF4-210ENST00000508235 USO1O60763 962 aaKnown RBP16.68■□□□□ 0.26
RNF4-210ENST00000508235 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 EIF4BP23588 611 aaKnown RBP16.68■□□□□ 0.26
RNF4-210ENST00000508235 MKRN4PQ13434 485 aaPredicted RBP16.68■□□□□ 0.26
RNF4-210ENST00000508235 DRP2Q13474 957 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 ZRSR1Q15695 479 aaKnown RBP16.68■□□□□ 0.26
RNF4-210ENST00000508235 ECM1Q16610 540 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 PADI6Q6TGC4 694 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 TMEM143Q96AN5 459 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 PPP1R16BQ96T49 567 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 OSMRQ99650 979 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 CSRNP2Q9H175 543 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 BHMT2Q9H2M3 363 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 ADAMTS10Q9H324 1103 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 CCDC39Q9UFE4 941 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 COL4A3BPQ9Y5P4 624 aa16.68■□□□□ 0.26
RNF4-210ENST00000508235 AMHP03971 560 aa16.67■□□□□ 0.26
RNF4-210ENST00000508235 ATP2A2P16615 1042 aaKnown RBP16.67■□□□□ 0.26
RNF4-210ENST00000508235 CYP11B2P19099 503 aa16.67■□□□□ 0.26
RNF4-210ENST00000508235 CD52P31358 61 aa16.67■□□□□ 0.26
RNF4-210ENST00000508235 SMAD3P84022 425 aaKnown RBP16.67■□□□□ 0.26
RNF4-210ENST00000508235 TFDP1Q14186 410 aa16.67■□□□□ 0.26
RNF4-210ENST00000508235 PRPF31Q8WWY3 499 aaKnown RBP16.67■□□□□ 0.26
RNF4-210ENST00000508235 NLRP4Q96MN2 994 aa16.67■□□□□ 0.26
RNF4-210ENST00000508235 XPNPEP1Q9NQW7 623 aa16.67■□□□□ 0.26
RNF4-210ENST00000508235 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
RNF4-210ENST00000508235 CXXC1Q9P0U4 656 aaPredicted RBP16.67■□□□□ 0.26
RNF4-210ENST00000508235 PADI3Q9ULW8 664 aa16.67■□□□□ 0.26
RNF4-210ENST00000508235 A0A087WWV3 80 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 E9PMD0 336 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 DARSP14868 501 aaKnown RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 WDR5P61964 334 aaKnown RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 KRT85P78386 507 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 DNM1Q05193 864 aaKnown RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 GRIN1Q05586 938 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 LAMTOR4Q0VGL1 99 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 NFX1Q12986 1120 aaKnown RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 TMEM119Q4V9L6 283 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 TMEM40Q8WWA1 233 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 TIPINQ9BVW5 301 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 OSBPL7Q9BZF2 842 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 AGO3Q9H9G7 860 aaKnown RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 CDHR5Q9HBB8 845 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 KCND2Q9NZV8 630 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 ZDHHC9Q9Y397 364 aa16.66■□□□□ 0.26
RNF4-210ENST00000508235 NOC2LQ9Y3T9 749 aaKnown RBP16.66■□□□□ 0.26
RNF4-210ENST00000508235 A0A087WZ62 844 aa16.65■□□□□ 0.26
RNF4-210ENST00000508235 CUTAO60888 179 aa16.65■□□□□ 0.26
RNF4-210ENST00000508235 SFPQP23246 707 aaKnown RBP eCLIP16.65■□□□□ 0.26
RNF4-210ENST00000508235 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
RNF4-210ENST00000508235 GRB10Q13322 594 aa16.65■□□□□ 0.26
RNF4-210ENST00000508235 FAM102BQ5T8I3 360 aa16.65■□□□□ 0.26
RNF4-210ENST00000508235 SRGAP1Q7Z6B7 1085 aa16.65■□□□□ 0.26
RNF4-210ENST00000508235 SYMPKQ92797 1274 aaKnown RBP16.65■□□□□ 0.26
RNF4-210ENST00000508235 FDXACB1Q9BRP7 624 aaPredicted RBP16.65■□□□□ 0.26
RNF4-210ENST00000508235 POLR3FQ9H1D9 316 aaPredicted RBP16.65■□□□□ 0.26
RNF4-210ENST00000508235 ERVK-5Q9HDB9 667 aa16.65■□□□□ 0.26
RNF4-210ENST00000508235 SRGAP2CP0DJJ0 459 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 NCLP19338 710 aaKnown RBP16.64■□□□□ 0.25
RNF4-210ENST00000508235 ARL2P36404 184 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 PHKA2P46019 1235 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 ME1P48163 572 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 KARSQ15046 597 aaKnown RBP16.64■□□□□ 0.25
RNF4-210ENST00000508235 PPP2R5AQ15172 486 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 PCBP1Q15365 356 aaKnown RBP eCLIP16.64■□□□□ 0.25
RNF4-210ENST00000508235 RAB30Q15771 203 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 TCTN1Q2MV58 587 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 SYT2Q8N9I0 419 aaPredicted RBP16.64■□□□□ 0.25
RNF4-210ENST00000508235 RNF149Q8NC42 400 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 KIFAP3Q92845 792 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 EPSTI1Q96J88 318 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 CLIC6Q96NY7 704 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 PLIN2Q99541 437 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 STK17AQ9UEE5 414 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 ST3GAL5Q9UNP4 418 aa16.64■□□□□ 0.25
RNF4-210ENST00000508235 GBF1Q92538 1859 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 TCHHQ07283 1943 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 DENND3A2RUS2 1198 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 SSBP05455 408 aaKnown RBP eCLIP16.63■□□□□ 0.25
RNF4-210ENST00000508235 PLA2G4BP0C869 781 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 ZSCAN20P17040 1043 aaPredicted RBP16.63■□□□□ 0.25
RNF4-210ENST00000508235 PLCG1P19174 1290 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 DDIT3P35638 169 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 SPECC1Q5M775 1068 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 CCDC73Q6ZRK6 1079 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 MAEAQ7L5Y9 396 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms