RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 GJB4Q9NTQ9 266 aa23.42■■□□□ 1.34
CLDND1-216ENST00000507944 FAM50BQ9Y247 325 aa23.42■■□□□ 1.34
CLDND1-216ENST00000507944 TMEM150BA6NC51 233 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 DDX11L8A8MPP1 907 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 CTDNEP1O95476 244 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 FGFR1P11362 822 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 DARSP14868 501 aaKnown RBP23.41■■□□□ 1.34
CLDND1-216ENST00000507944 GTF2F1P35269 517 aaKnown RBP eCLIP23.41■■□□□ 1.34
CLDND1-216ENST00000507944 PPP4R3AQ6IN85 833 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 NEK8Q86SG6 692 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 NLRP7Q8WX94 980 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 KHSRPQ92945 711 aaKnown RBP eCLIP23.41■■□□□ 1.343e-6■■■□□ 14.8
CLDND1-216ENST00000507944 PPP2R3CQ969Q6 453 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 CEP89Q96ST8 783 aa23.41■■□□□ 1.34
CLDND1-216ENST00000507944 TYW1Q9NV66 732 aaKnown RBP23.41■■□□□ 1.34
CLDND1-216ENST00000507944 ORC3Q9UBD5 711 aaPredicted RBP23.41■■□□□ 1.34
CLDND1-216ENST00000507944 GCFC2P16383 781 aaKnown RBP23.4■■□□□ 1.34
CLDND1-216ENST00000507944 IRS1P35568 1242 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 PSMC5P62195 406 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 CDC42EP1Q00587 391 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 DLX2Q07687 328 aaPredicted RBP23.4■■□□□ 1.34
CLDND1-216ENST00000507944 DRP2Q13474 957 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 PIK3AP1Q6ZUJ8 805 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 OXER1Q8TDS5 423 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 WASF1Q92558 559 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 FAM20AQ96MK3 541 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 SH2D3AQ9BRG2 576 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 KCNMB3Q9NPA1 279 aa23.4■■□□□ 1.34
CLDND1-216ENST00000507944 PLXNA4Q9HCM2 1894 aa23.39■■□□□ 1.34
CLDND1-216ENST00000507944 IGKV6-21A0A0C4DH24 114 aa23.39■■□□□ 1.33
CLDND1-216ENST00000507944 EML1O00423 815 aa23.39■■□□□ 1.33
CLDND1-216ENST00000507944 SSTR3P32745 418 aaPredicted RBP23.39■■□□□ 1.33
CLDND1-216ENST00000507944 DNM2P50570 870 aa23.39■■□□□ 1.33
CLDND1-216ENST00000507944 PPP2R5CQ13362 524 aa23.39■■□□□ 1.33
CLDND1-216ENST00000507944 ADAM15Q13444 863 aa23.39■■□□□ 1.33
CLDND1-216ENST00000507944 TMEM117Q9H0C3 514 aa23.39■■□□□ 1.33
CLDND1-216ENST00000507944 HCSTQ9UBK5 93 aa23.39■■□□□ 1.33
CLDND1-216ENST00000507944 LINC01565O15544 149 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 HOXA2O43364 376 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 CCNT1O60563 726 aaKnown RBP23.38■■□□□ 1.33
CLDND1-216ENST00000507944 FGFR4P22455 802 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 UBE3AQ05086 875 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 CLUL1Q15846 466 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 ADGRD2Q7Z7M1 963 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 ECHDC2Q86YB7 292 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 NECAB1Q8N987 351 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 COLGALT1Q8NBJ5 622 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 NAP1L4Q99733 375 aaKnown RBP23.38■■□□□ 1.33
CLDND1-216ENST00000507944 GCOM2Q9BZD3 368 aaPredicted RBP23.38■■□□□ 1.33
CLDND1-216ENST00000507944 CWH43Q9H720 699 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 VAV3Q9UKW4 847 aa23.38■■□□□ 1.33
CLDND1-216ENST00000507944 PI4K2BG5E9Z4 385 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 MAFO75444 373 aaPredicted RBP23.37■■□□□ 1.33
CLDND1-216ENST00000507944 CSDE1O75534 798 aaKnown RBP23.37■■□□□ 1.33
CLDND1-216ENST00000507944 FGF18O76093 207 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 FDPSP14324 419 aaKnown RBP23.37■■□□□ 1.33
CLDND1-216ENST00000507944 QARSP47897 775 aaKnown RBP23.37■■□□□ 1.33
CLDND1-216ENST00000507944 ME3Q16798 604 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 CSPP1Q1MSJ5 1256 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 ANO5Q75V66 913 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 THNSL1Q8IYQ7 743 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 MICAL1Q8TDZ2 1067 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 CASD1Q96PB1 797 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 RNF19AQ9NV58 838 aa23.37■■□□□ 1.33
CLDND1-216ENST00000507944 SUCLA2Q9P2R7 463 aaPredicted RBP23.37■■□□□ 1.33
CLDND1-216ENST00000507944 A0A087WZ62 844 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 TBX3O15119 743 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 MARCH6O60337 910 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 TBX10O75333 385 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 LAG3P18627 525 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 EARS2Q5JPH6 523 aaKnown RBP23.36■■□□□ 1.33
CLDND1-216ENST00000507944 RBM23Q86U06 439 aaKnown RBP23.36■■□□□ 1.33
CLDND1-216ENST00000507944 ABI1Q8IZP0 508 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 EFHBQ8N7U6 833 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 HAS1Q92839 578 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 FDXACB1Q9BRP7 624 aaPredicted RBP23.36■■□□□ 1.33
CLDND1-216ENST00000507944 DACT1Q9NYF0 836 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 PRKAG3Q9UGI9 489 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 RAPGEFL1Q9UHV5 662 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 PCDHGC5Q9Y5F6 944 aa23.36■■□□□ 1.33
CLDND1-216ENST00000507944 A0A0U1RQF3 1178 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 DKC1O60832 514 aaKnown RBP eCLIP23.35■■□□□ 1.33
CLDND1-216ENST00000507944 P4HBP07237 508 aaKnown RBP23.35■■□□□ 1.33
CLDND1-216ENST00000507944 NRIP1P48552 1158 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 NDUFV1P49821 464 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 PLA2G4FQ68DD2 849 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 LRRC55Q6ZSA7 311 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 RHPN2Q8IUC4 686 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 RNF169Q8NCN4 708 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 GTF3C6Q969F1 213 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 JPH2Q9BR39 696 aaPredicted RBP23.35■■□□□ 1.33
CLDND1-216ENST00000507944 LRFN3Q9BTN0 628 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 CYP26B1Q9NR63 512 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 TLR9Q9NR96 1032 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 CHST12Q9NRB3 414 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 CD207Q9UJ71 328 aa23.35■■□□□ 1.33
CLDND1-216ENST00000507944 MBTPS2O43462 519 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 EIF5BO60841 1220 aaKnown RBP23.34■■□□□ 1.33
CLDND1-216ENST00000507944 LARGE1O95461 756 aa23.34■■□□□ 1.33
CLDND1-216ENST00000507944 EOMESO95936 686 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms