RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 DEFB103AP81534 67 aa18.24■□□□□ 0.51
DDR1-261ENST00000507901 FOXD4L5Q5VV16 416 aaPredicted RBP18.24■□□□□ 0.51
DDR1-261ENST00000507901 FAM43BQ6ZT52 329 aaPredicted RBP18.24■□□□□ 0.51
DDR1-261ENST00000507901 FAM228AQ86W67 206 aa18.24■□□□□ 0.51
DDR1-261ENST00000507901 CRIPAKQ8N1N5 446 aa18.24■□□□□ 0.51
DDR1-261ENST00000507901 PHOSPHO2Q8TCD6 241 aa18.24■□□□□ 0.51
DDR1-261ENST00000507901 FOXD4L4Q8WXT5 416 aaPredicted RBP18.24■□□□□ 0.51
DDR1-261ENST00000507901 MTRQ99707 1265 aa18.24■□□□□ 0.51
DDR1-261ENST00000507901 MTIF3Q9H2K0 278 aaKnown RBP18.24■□□□□ 0.51
DDR1-261ENST00000507901 ATP6V0A4Q9HBG4 840 aa18.24■□□□□ 0.51
DDR1-261ENST00000507901 SUCLA2Q9P2R7 463 aaPredicted RBP18.24■□□□□ 0.51
DDR1-261ENST00000507901 PADI3Q9ULW8 664 aa18.24■□□□□ 0.51
DDR1-261ENST00000507901 COL4A6Q14031 1691 aa18.24■□□□□ 0.51
DDR1-261ENST00000507901 TCHHQ07283 1943 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 YEATS4O95619 227 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 EYA4O95677 639 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 DARSP14868 501 aaKnown RBP18.23■□□□□ 0.51
DDR1-261ENST00000507901 EIF4BP23588 611 aaKnown RBP18.23■□□□□ 0.51
DDR1-261ENST00000507901 MARCKSP29966 332 aaPredicted RBP18.23■□□□□ 0.51
DDR1-261ENST00000507901 CDC42EP1Q00587 391 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 IKBKEQ14164 716 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
DDR1-261ENST00000507901 RTN4RL1Q86UN2 441 aaPredicted RBP18.23■□□□□ 0.51
DDR1-261ENST00000507901 ZNF410Q86VK4 478 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 PRPF31Q8WWY3 499 aaKnown RBP18.23■□□□□ 0.51
DDR1-261ENST00000507901 TMEM143Q96AN5 459 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 PPP1R16BQ96T49 567 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 SLC9A7Q96T83 725 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 CCSER1Q9C0I3 900 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 CSRNP2Q9H175 543 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 IFT122Q9HBG6 1241 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 SLC4A7Q9Y6M7 1214 aa18.23■□□□□ 0.51
DDR1-261ENST00000507901 TMEM265A0A087WTH1 108 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 GRXCR1A8MXD5 290 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 E9PMD0 336 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 PPP6R2O75170 966 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 CYP11B2P19099 503 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 DNM2P50570 870 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 CEBPZQ03701 1054 aaKnown RBP18.22■□□□□ 0.51
DDR1-261ENST00000507901 ATL3Q6DD88 541 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 PADI6Q6TGC4 694 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 USP49Q70CQ1 688 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 CABP7Q86V35 215 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 KSR1Q8IVT5 923 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 ASAP3Q8TDY4 903 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 TCP11Q8WWU5 503 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 PSPC1Q8WXF1 523 aaKnown RBP18.22■□□□□ 0.51
DDR1-261ENST00000507901 ZNF396Q96N95 335 aaPredicted RBP18.22■□□□□ 0.51
DDR1-261ENST00000507901 CLIC6Q96NY7 704 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 BMP2KQ9NSY1 1161 aaPredicted RBP18.22■□□□□ 0.51
DDR1-261ENST00000507901 TFIP11Q9UBB9 837 aaKnown RBP18.22■□□□□ 0.51
DDR1-261ENST00000507901 COL4A3BPQ9Y5P4 624 aa18.22■□□□□ 0.51
DDR1-261ENST00000507901 A0A087WZ62 844 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 ZBBXA8MT70 800 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 MGEA5O60502 916 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 USO1O60763 962 aaKnown RBP18.21■□□□□ 0.51
DDR1-261ENST00000507901 RPS6KA5O75582 802 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 ATP2A2P16615 1042 aaKnown RBP18.21■□□□□ 0.51
DDR1-261ENST00000507901 GLRA2P23416 452 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 POU5F1BQ06416 359 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 LAMTOR4Q0VGL1 99 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 DSC3Q14574 896 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 IFNLR1Q8IU57 520 aaPredicted RBP18.21■□□□□ 0.51
DDR1-261ENST00000507901 RHPN2Q8IUC4 686 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 EPSTI1Q96J88 318 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 ZNF668Q96K58 619 aaPredicted RBP18.21■□□□□ 0.51
DDR1-261ENST00000507901 FAM161BQ96MY7 647 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 FDXACB1Q9BRP7 624 aaPredicted RBP18.21■□□□□ 0.51
DDR1-261ENST00000507901 PBX4Q9BYU1 374 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 NT5C3AQ9H0P0 336 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 TSPYL2Q9H2G4 693 aaPredicted RBP18.21■□□□□ 0.51
DDR1-261ENST00000507901 SEMA6BQ9H3T3 888 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 BLOC1S4Q9NUP1 217 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 ST3GAL5Q9UNP4 418 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 GINS2Q9Y248 185 aa18.21■□□□□ 0.51
DDR1-261ENST00000507901 ARHGEF35A5YM69 484 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 ENPP3O14638 875 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 SPTLC2O15270 562 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 ASAP2O43150 1006 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 PBX2P40425 430 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 SLC12A3P55017 1021 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 DNM1Q05193 864 aaKnown RBP18.2■□□□□ 0.5
DDR1-261ENST00000507901 PAK2Q13177 524 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 AXDND1Q5T1B0 1012 aaPredicted RBP18.2■□□□□ 0.5
DDR1-261ENST00000507901 C1orf186Q6ZWK4 172 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 HERC6Q8IVU3 1022 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 KRI1Q8N9T8 703 aaKnown RBP18.2■□□□□ 0.5
DDR1-261ENST00000507901 MCPH1Q8NEM0 835 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 GUCD1Q96NT3 240 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 FTHL17Q9BXU8 183 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 NFKBIZQ9BYH8 718 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 GPRC5CQ9NQ84 441 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 DNM3Q9UQ16 869 aa18.2■□□□□ 0.5
DDR1-261ENST00000507901 YBX2Q9Y2T7 364 aaKnown RBP18.2■□□□□ 0.5
DDR1-261ENST00000507901 CHD7Q9P2D1 2997 aa18.19■□□□□ 0.5
DDR1-261ENST00000507901 GPR182O15218 404 aa18.19■□□□□ 0.5
DDR1-261ENST00000507901 PTENP60484 403 aa18.19■□□□□ 0.5
DDR1-261ENST00000507901 MAPK7Q13164 816 aa18.19■□□□□ 0.5
DDR1-261ENST00000507901 CAPSQ13938 189 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms