RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TMEM161AQ9NX61 479 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 EPS15L1Q9UBC2 864 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 ST3GAL5Q9UNP4 418 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 NOC2LQ9Y3T9 749 aaKnown RBP8.35□□□□□ -1.07
VCAN-207ENST00000507162 IGSF10Q6WRI0 2623 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 RALGAPA1Q6GYQ0 2036 aa8.35□□□□□ -1.07
VCAN-207ENST00000507162 RRN3P2A6NIE6 340 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 EIF4E1BA6NMX2 242 aaKnown RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 CYSRT1A8MQ03 144 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 SPATA31C2B4DYI2 1134 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 HOXA2O43364 376 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 RPLP2P05387 115 aaKnown RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 SSBP05455 408 aaKnown RBP eCLIP8.34□□□□□ -1.07
VCAN-207ENST00000507162 NRLP54845 237 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 FAM189BP81408 668 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 GIT2Q14161 759 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 MLF2Q15773 248 aaPredicted RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 PSAPL1Q6NUJ1 521 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 C19orf48Q6RUI8 117 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 C15orf39Q6ZRI6 1047 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 FTSJ3Q8IY81 847 aaKnown RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 LRRC43Q8N309 656 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 KBTBD3Q8NAB2 608 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 ZCCHC14Q8WYQ9 949 aaKnown RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 PPP1R16BQ96T49 567 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 RPP25Q9BUL9 199 aaKnown RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 FAM126AQ9BYI3 521 aaPredicted RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 ZBP1Q9H171 429 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 CDHR5Q9HBB8 845 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 WDR6Q9NNW5 1121 aaKnown RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 ERAP1Q9NZ08 941 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 ANKFY1Q9P2R3 1169 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 NUMBLQ9Y6R0 609 aa8.34□□□□□ -1.07
VCAN-207ENST00000507162 FNDC1Q4ZHG4 1894 aaPredicted RBP8.34□□□□□ -1.07
VCAN-207ENST00000507162 TMEM8BA6NDV4 472 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 TM4SF5O14894 197 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 GPR182O15218 404 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 NCAM2O15394 837 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 ORC4O43929 436 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 ZFYP08048 801 aaPredicted RBP8.33□□□□□ -1.08
VCAN-207ENST00000507162 CTSAP10619 480 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 LAMP2P13473 410 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 MAGEA9P43362 315 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 BCAR1P56945 870 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 MTAPQ13126 283 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 CCDC6Q16204 474 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 ODR4Q5SWX8 454 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 GET4Q7L5D6 327 aaPredicted RBP8.33□□□□□ -1.08
VCAN-207ENST00000507162 NME8Q8N427 588 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 C12orf50Q8NA57 414 aaPredicted RBP8.33□□□□□ -1.08
VCAN-207ENST00000507162 TRAPPC12Q8WVT3 735 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 SEPT1Q8WYJ6 367 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 SMG7Q92540 1137 aaKnown RBP8.33□□□□□ -1.08
VCAN-207ENST00000507162 MAP4K1Q92918 833 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 EMILIN2Q9BXX0 1053 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 SMARCAD1Q9H4L7 1026 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 ELAC1Q9H777 363 aaKnown RBP8.33□□□□□ -1.08
VCAN-207ENST00000507162 PIDD1Q9HB75 910 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 LTB4R2Q9NPC1 389 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 TCP11L1Q9NUJ3 509 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 PCDHA2Q9Y5H9 948 aa8.33□□□□□ -1.08
VCAN-207ENST00000507162 CLUHO75153 1309 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 GCOM1H8Y6P7 765 aaPredicted RBP8.32□□□□□ -1.08
VCAN-207ENST00000507162 OPLAHO14841 1288 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 INPPL1O15357 1258 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 FIBPO43427 364 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 FOXD2O60548 495 aaPredicted RBP8.32□□□□□ -1.08
VCAN-207ENST00000507162 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 TOP3BO95985 862 aaKnown RBP8.32□□□□□ -1.08
VCAN-207ENST00000507162 POLR2MP0CAP2 368 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 SNHG28P0DPA3 235 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 CLCN4P51793 760 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 MRPS9P82933 396 aaKnown RBP8.32□□□□□ -1.08
VCAN-207ENST00000507162 PRKCQQ04759 706 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 WTAPQ15007 396 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 SF3A2Q15428 464 aaKnown RBP8.32□□□□□ -1.08
VCAN-207ENST00000507162 STPG1Q5TH74 334 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 DDX53Q86TM3 631 aaKnown RBP8.32□□□□□ -1.08
VCAN-207ENST00000507162 HELQQ8TDG4 1101 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 TTC14Q96N46 770 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 KLHL5Q96PQ7 755 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 AMNQ9BXJ7 453 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 ADAM33Q9BZ11 813 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 OSBPL6Q9BZF3 934 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 JMJD4Q9H9V9 463 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 FAM217BQ9NTX9 383 aaPredicted RBP8.32□□□□□ -1.08
VCAN-207ENST00000507162 RNF19AQ9NV58 838 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 MAP3K20Q9NYL2 800 aaKnown RBP8.32□□□□□ -1.08
VCAN-207ENST00000507162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.32□□□□□ -1.08
VCAN-207ENST00000507162 IRAK3Q9Y616 596 aa8.32□□□□□ -1.08
VCAN-207ENST00000507162 LOC400499M0QZD8 3231 aa8.31□□□□□ -1.08
VCAN-207ENST00000507162 GSTTP1A0A1W2PQM5 241 aa8.31□□□□□ -1.08
VCAN-207ENST00000507162 TRIM6-TRIM34B2RNG4 842 aa8.31□□□□□ -1.08
VCAN-207ENST00000507162 ANHXE9PGG2 379 aa8.31□□□□□ -1.08
VCAN-207ENST00000507162 AXIN1O15169 862 aa8.31□□□□□ -1.08
VCAN-207ENST00000507162 HRO43593 1189 aa8.31□□□□□ -1.08
VCAN-207ENST00000507162 SMARCA5O60264 1052 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms