RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 HPS3Q969F9 1004 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 SLC2A13Q96QE2 648 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 TAAR9Q96RI9 348 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 MAP3K14Q99558 947 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 FOXB1Q99853 325 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 SLC12A5Q9H2X9 1139 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 RXFP1Q9HBX9 757 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 TNFRSF12AQ9NP84 129 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 ARHGAP28Q9P2N2 729 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 CCDC39Q9UFE4 941 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 DDX20Q9UHI6 824 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 ARHGEF11O15085 1522 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 TOPBP1Q92547 1522 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 RIMBP3CA6NJZ7 1639 aa4.09□□□□□ -1.76
TRAPPC11-205ENST00000506426 RIMBP3BA6NNM3 1639 aa4.09□□□□□ -1.76
TRAPPC11-205ENST00000506426 RIMBP3Q9UFD9 1639 aa4.09□□□□□ -1.76
TRAPPC11-205ENST00000506426 EFEMP2O95967 443 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 MPOP05164 745 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 AOAHP28039 575 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 TRHRP34981 398 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 SLC16A1P53985 500 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 LGALS4P56470 323 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZNF267Q14586 743 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 MYBPC3Q14896 1274 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 MUM1Q2TAK8 710 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 UAP1L1Q3KQV9 507 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZBTB41Q5SVQ8 909 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 MBNL2Q5VZF2 373 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 IL31Q6EBC2 164 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 SLFN12LQ6IEE8 588 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 CHST15Q7LFX5 561 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 KANSL1Q7Z3B3 1105 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 SRGAP1Q7Z6B7 1085 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 CATIPQ7Z7H3 387 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 C11orf96Q7Z7L8 435 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 GRAMD1CQ8IYS0 662 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 THEMISQ8N1K5 641 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 SHISA4Q96DD7 197 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 C1GALT1C1Q96EU7 318 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 TOE1Q96GM8 510 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM193BQ96PV7 902 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 IFT140Q96RY7 1462 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 KCTD10Q9H3F6 313 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM204AQ9H8W3 233 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 IFT122Q9HBG6 1241 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 DDX21Q9NR30 783 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 C19orf73Q9NVV2 129 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 UCKL1Q9NWZ5 548 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 DTLQ9NZJ0 730 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 BTBD7Q9P203 1132 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 DPP7Q9UHL4 492 aa4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 ANGEL1Q9UNK9 670 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-205ENST00000506426 AQRO60306 1485 aaKnown RBP eCLIP4.07□□□□□ -1.761e-6■■□□□ 11.4
TRAPPC11-205ENST00000506426 MYPNQ86TC9 1320 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 NFIBO00712 420 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 APAF1O14727 1248 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 DTNBO60941 627 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 PRLP01236 227 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 ENO2P09104 434 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 PDCP20941 246 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 PTGS1P23219 599 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 NEK3P51956 506 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 BCAR1P56945 870 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 ERVFRD-1P60508 538 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 PRR5P85299 388 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 CDK17Q00537 523 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 TMEM62Q0P6H9 643 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 MORC3Q14149 939 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 SPIDRQ14159 915 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 RAB3GAP1Q15042 981 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 PLCL1Q15111 1095 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZNF124Q15973 351 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 ANO4Q32M45 955 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 TIGD5Q53EQ6 642 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 LILRA6Q6PI73 481 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 UNQ6494/PRO21346Q6UXR6 183 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 USP45Q70EL2 814 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM43AQ8N2R8 423 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 AGBL5Q8NDL9 886 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 OR14C36Q8NHC7 312 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 DIS3LQ8TF46 1054 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 RPGRQ92834 1020 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 FATE1Q969F0 183 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 COA7Q96BR5 231 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 TSPAN17Q96FV3 270 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 ACO2Q99798 780 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 ACE2Q9BYF1 805 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 GTPBP4Q9BZE4 634 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 NGRNQ9NPE2 291 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 PAK6Q9NQU5 681 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 HSPBP1Q9NZL4 362 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 TUBD1Q9UJT1 453 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 TMPRSS11EQ9UL52 423 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 DNM3Q9UQ16 869 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM50BQ9Y247 325 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 PTPN22Q9Y2R2 807 aa4.07□□□□□ -1.76
TRAPPC11-205ENST00000506426 POLA1P09884 1462 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 RAD54L2Q9Y4B4 1467 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 NUDT19A8MXV4 375 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms