RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 GRB10Q13322 594 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 NBR1Q14596 966 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 XKR9Q5GH70 373 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 RHPN2Q8IUC4 686 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 GDPD5Q8WTR4 605 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 GCOM2Q9BZD3 368 aaPredicted RBP17.37■□□□□ 0.37
MED28-204ENST00000506409 C1orf112Q9NSG2 853 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 LRFN2Q9ULH4 789 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 ADGRA3Q8IWK6 1321 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 PRUNE2Q8WUY3 3088 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 ZBTB39O15060 712 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 DGKIO75912 1065 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 LYPLA2O95372 231 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 POU3F3P20264 500 aaPredicted RBP17.36■□□□□ 0.37
MED28-204ENST00000506409 SARSP49591 514 aaKnown RBP17.36■□□□□ 0.37
MED28-204ENST00000506409 CCDC85BQ15834 202 aaPredicted RBP17.36■□□□□ 0.37
MED28-204ENST00000506409 SLC24A5Q71RS6 500 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.36■□□□□ 0.37
MED28-204ENST00000506409 CRIPAKQ8N1N5 446 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 MICALL1Q8N3F8 863 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 FIBCD1Q8N539 461 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 FBXO22Q8NEZ5 403 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 SAMD11Q96NU1 681 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 DHX33Q9H6R0 707 aaKnown RBP17.36■□□□□ 0.37
MED28-204ENST00000506409 RC3H2Q9HBD1 1191 aaKnown RBP17.36■□□□□ 0.37
MED28-204ENST00000506409 RGS18Q9NS28 235 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 BMP2KQ9NSY1 1161 aaPredicted RBP17.36■□□□□ 0.37
MED28-204ENST00000506409 MTCH2Q9Y6C9 303 aa17.36■□□□□ 0.37
MED28-204ENST00000506409 A0A087WZ62 844 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 GAS2O43903 313 aaKnown RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 LPXNO60711 386 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 TOB1P50616 345 aaPredicted RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 BTG3Q14201 252 aaPredicted RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 EMC2Q15006 297 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 EPC2Q52LR7 807 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 ZNF410Q86VK4 478 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 ERMNQ8TAM6 284 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 PSPC1Q8WXF1 523 aaKnown RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 ZNF689Q96CS4 500 aaPredicted RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 NLRP4Q96MN2 994 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 CCDC43Q96MW1 224 aaKnown RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 FDXACB1Q9BRP7 624 aaPredicted RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 ANKEF1Q9NU02 776 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 PCDHB7Q9Y5E2 793 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 PCDHB6Q9Y5E3 794 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 TRANK1O15050 2925 aa17.35■□□□□ 0.37
MED28-204ENST00000506409 COL4A4P53420 1690 aaPredicted RBP17.35■□□□□ 0.37
MED28-204ENST00000506409 C9IYK1 514 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 CSDE1O75534 798 aaKnown RBP17.34■□□□□ 0.37
MED28-204ENST00000506409 ZSCAN20P17040 1043 aaPredicted RBP17.34■□□□□ 0.37
MED28-204ENST00000506409 FGFR4P22455 802 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 DSC3Q14574 896 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 PRRC2BQ5JSZ5 2229 aaKnown RBP17.34■□□□□ 0.37
MED28-204ENST00000506409 LARP1BQ659C4 914 aaKnown RBP17.34■□□□□ 0.37
MED28-204ENST00000506409 KSR1Q8IVT5 923 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 TMEM192Q8IY95 271 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 C4orf32Q8N8J7 132 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 TCP11Q8WWU5 503 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 TMEM143Q96AN5 459 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 MTRQ99707 1265 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 TUFT1Q9NNX1 390 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 COL4A3BPQ9Y5P4 624 aa17.34■□□□□ 0.37
MED28-204ENST00000506409 ARID2Q68CP9 1835 aa17.33■□□□□ 0.37
MED28-204ENST00000506409 SPATA31C1P0DKV0 1188 aa17.33■□□□□ 0.36
MED28-204ENST00000506409 SFPQP23246 707 aaKnown RBP eCLIP17.33■□□□□ 0.36
MED28-204ENST00000506409 PTGDRQ13258 359 aa17.33■□□□□ 0.36
MED28-204ENST00000506409 CUL4AQ13619 759 aa17.33■□□□□ 0.36
MED28-204ENST00000506409 PAN2Q504Q3 1202 aaKnown RBP17.33■□□□□ 0.36
MED28-204ENST00000506409 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.36
MED28-204ENST00000506409 CATSPER3Q86XQ3 398 aa17.33■□□□□ 0.36
MED28-204ENST00000506409 CMTR2Q8IYT2 770 aaKnown RBP17.33■□□□□ 0.36
MED28-204ENST00000506409 PIGOQ8TEQ8 1089 aa17.33■□□□□ 0.36
MED28-204ENST00000506409 PRPF31Q8WWY3 499 aaKnown RBP17.33■□□□□ 0.36
MED28-204ENST00000506409 POLR3CQ9BUI4 534 aaPredicted RBP17.33■□□□□ 0.36
MED28-204ENST00000506409 INO80BQ9C086 356 aaPredicted RBP17.33■□□□□ 0.36
MED28-204ENST00000506409 RWDD3Q9Y3V2 267 aa17.33■□□□□ 0.36
MED28-204ENST00000506409 UNC80Q8N2C7 3258 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 MED24O75448 989 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 DGAT1O75907 488 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 XRCC6P12956 609 aaKnown RBP eCLIP17.32■□□□□ 0.36
MED28-204ENST00000506409 CTNNB1P35222 781 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 RARRES1P49788 294 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
MED28-204ENST00000506409 LAMTOR4Q0VGL1 99 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 HAUS3Q68CZ6 603 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 CLP1Q92989 425 aaKnown RBP17.32■□□□□ 0.36
MED28-204ENST00000506409 ATP6V0A4Q9HBG4 840 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 XPNPEP1Q9NQW7 623 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 TMEM161AQ9NX61 479 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 LMCD1Q9NZU5 365 aa17.32■□□□□ 0.36
MED28-204ENST00000506409 A0A087WWV3 80 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 H3BNC9 293 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 LAD1O00515 517 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 LINC00271P0C7V0 271 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 SRGAP2CP0DJJ0 459 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 RPA1P27694 616 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 BMPR1AP36894 532 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 GATMP50440 423 aa17.31■□□□□ 0.36
MED28-204ENST00000506409 FAM189BP81408 668 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms