RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TLL1O43897 1013 aa19.91■□□□□ 0.78
SMN1-204ENST00000506163 XRCC6P12956 609 aaKnown RBP eCLIP19.91■□□□□ 0.78
SMN1-204ENST00000506163 FGFR4P22455 802 aa19.91■□□□□ 0.78
SMN1-204ENST00000506163 POLGP54098 1239 aaPredicted RBP19.91■□□□□ 0.78
SMN1-204ENST00000506163 EMC2Q15006 297 aa19.91■□□□□ 0.78
SMN1-204ENST00000506163 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
SMN1-204ENST00000506163 CDX2Q99626 313 aaPredicted RBP19.91■□□□□ 0.78
SMN1-204ENST00000506163 TSPYL2Q9H2G4 693 aaPredicted RBP19.91■□□□□ 0.78
SMN1-204ENST00000506163 PPME1Q9Y570 386 aa19.91■□□□□ 0.78
SMN1-204ENST00000506163 A0A087WZ62 844 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 UPP2O95045 317 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 DARSP14868 501 aaKnown RBP19.9■□□□□ 0.78
SMN1-204ENST00000506163 EIF4BP23588 611 aaKnown RBP19.9■□□□□ 0.78
SMN1-204ENST00000506163 RFC5P40937 340 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 DTHD1Q6ZMT9 781 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 RHPN2Q8IUC4 686 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 ERMNQ8TAM6 284 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 PRPF31Q8WWY3 499 aaKnown RBP19.9■□□□□ 0.78
SMN1-204ENST00000506163 SLC7A3Q8WY07 619 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 RAD9AQ99638 391 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 FDXACB1Q9BRP7 624 aaPredicted RBP19.9■□□□□ 0.78
SMN1-204ENST00000506163 ZBED2Q9BTP6 218 aa19.9■□□□□ 0.78
SMN1-204ENST00000506163 COL6A3P12111 3177 aa19.89■□□□□ 0.78
SMN1-204ENST00000506163 CCT6AP40227 531 aaKnown RBP19.89■□□□□ 0.77
SMN1-204ENST00000506163 DNM2P50570 870 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 HTRA4P83105 476 aaPredicted RBP19.89■□□□□ 0.77
SMN1-204ENST00000506163 TAP1Q03518 808 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 GRIN1Q05586 938 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 DSC3Q14574 896 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 SF3A1Q15459 793 aaKnown RBP19.89■□□□□ 0.77
SMN1-204ENST00000506163 NLRP7Q8WX94 980 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 NACC1Q96RE7 527 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 JPH2Q9BR39 696 aaPredicted RBP19.89■□□□□ 0.77
SMN1-204ENST00000506163 SLC28A3Q9HAS3 691 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 IFT122Q9HBG6 1241 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 CLIC4Q9Y696 253 aa19.89■□□□□ 0.77
SMN1-204ENST00000506163 VWA3AA6NCI4 1184 aa19.88■□□□□ 0.77
SMN1-204ENST00000506163 EPOPA6NHQ4 379 aa19.88■□□□□ 0.77
SMN1-204ENST00000506163 GPR182O15218 404 aa19.88■□□□□ 0.77
SMN1-204ENST00000506163 LAMTOR4Q0VGL1 99 aa19.88■□□□□ 0.77
SMN1-204ENST00000506163 PTPAQ15257 358 aa19.88■□□□□ 0.77
SMN1-204ENST00000506163 ARL6IP4Q66PJ3 421 aaKnown RBP19.88■□□□□ 0.77
SMN1-204ENST00000506163 FTHL17Q9BXU8 183 aa19.88■□□□□ 0.77
SMN1-204ENST00000506163 DBR1Q9UK59 544 aaKnown RBP19.88■□□□□ 0.77
SMN1-204ENST00000506163 KIAA1024Q9UPX6 916 aa19.88■□□□□ 0.77
SMN1-204ENST00000506163 COL4A3BPQ9Y5P4 624 aa19.88■□□□□ 0.77
SMN1-204ENST00000506163 DGAT1O75907 488 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 ARL2P36404 184 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 PKP1Q13835 747 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 PPP2R2DQ66LE6 453 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 KCNK18Q7Z418 384 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 ZNF710Q8N1W2 664 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 SNX29Q8TEQ0 813 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 NLRP4Q96MN2 994 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 MTRQ99707 1265 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 ADAM2Q99965 735 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 MINDY3Q9H8M7 445 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 CERS4Q9HA82 394 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 GPRC5CQ9NQ84 441 aa19.87■□□□□ 0.77
SMN1-204ENST00000506163 USO1O60763 962 aaKnown RBP19.86■□□□□ 0.77
SMN1-204ENST00000506163 SRGAP2CP0DJJ0 459 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 MUTP22033 750 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 HAUS3Q68CZ6 603 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 ZNF410Q86VK4 478 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 EXOC8Q8IYI6 725 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 SP7Q8TDD2 431 aaPredicted RBP19.86■□□□□ 0.77
SMN1-204ENST00000506163 ASAP3Q8TDY4 903 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 PSPC1Q8WXF1 523 aaKnown RBP19.86■□□□□ 0.77
SMN1-204ENST00000506163 MYLIPQ8WY64 445 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 SCLT1Q96NL6 688 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 PNMA5Q96PV4 448 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 GCOM2Q9BZD3 368 aaPredicted RBP19.86■□□□□ 0.77
SMN1-204ENST00000506163 PRDM12Q9H4Q4 367 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 RC3H2Q9HBD1 1191 aaKnown RBP19.86■□□□□ 0.77
SMN1-204ENST00000506163 ATP6V0A4Q9HBG4 840 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 RGS18Q9NS28 235 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 DDX19AQ9NUU7 478 aaKnown RBP19.86■□□□□ 0.77
SMN1-204ENST00000506163 INSL6Q9Y581 213 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 COL4A6Q14031 1691 aa19.86■□□□□ 0.77
SMN1-204ENST00000506163 LINC01553A4QN01 128 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 C9IYK1 514 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 CDC42EP1Q00587 391 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 MAEAQ7L5Y9 396 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 RAB34Q9BZG1 259 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 POLD4Q9HCU8 107 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 E9PMD0 336 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 RFXAPO00287 272 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 GAS2O43903 313 aaKnown RBP19.85■□□□□ 0.77
SMN1-204ENST00000506163 GLRA2P23416 452 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 FAM189BP81408 668 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 GRB10Q13322 594 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 ADGRE1Q14246 886 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 FOXD4L5Q5VV16 416 aaPredicted RBP19.85■□□□□ 0.77
SMN1-204ENST00000506163 KRT79Q5XKE5 535 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 PADI6Q6TGC4 694 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 LRRC15Q8TF66 581 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 TCP11Q8WWU5 503 aa19.85■□□□□ 0.77
SMN1-204ENST00000506163 FOXD4L4Q8WXT5 416 aaPredicted RBP19.85■□□□□ 0.77
SMN1-204ENST00000506163 ZNF689Q96CS4 500 aaPredicted RBP19.85■□□□□ 0.77
SMN1-204ENST00000506163 USP28Q96RU2 1077 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms