RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PRAMEF18Q5VWM3 479 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 VPS36Q86VN1 386 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 RIOX2Q8IUF8 465 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 ZC3H15Q8WU90 426 aaKnown RBP18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 SPIRE2Q8WWL2 714 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 JPH1Q9HDC5 661 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 TSKSQ9UJT2 592 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 SAR1BQ9Y6B6 198 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 CTAGE15A4D2H0 777 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 CLIC2O15247 247 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 CCNE2O96020 404 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 CTAGE8P0CG41 777 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 KLHL30Q0D2K2 578 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 CETN1Q12798 172 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 RAPGEF1Q13905 1077 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 STXBP2Q15833 593 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 IQCEQ6IPM2 695 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 CTAGE6Q86UF2 777 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 CTAGE4Q8IX94 777 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 MCPH1Q8NEM0 835 aa18.89■□□□□ 0.61
TRAPPC11-204ENST00000505676 ZNF263O14978 683 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 PMM2O15305 246 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 ATP8B1O43520 1251 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 ATP9AO75110 1047 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 EIF3JO75822 258 aaKnown RBP18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 KCNA1Q09470 495 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 XKR9Q5GH70 373 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 DPY19L2P1Q6NXN4 242 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 MIS18BP1Q6P0N0 1132 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 FBXO38Q6PIJ6 1188 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 KCNN1Q92952 543 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 MPHOSPH6Q99547 160 aaKnown RBP18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 CRACR2AQ9BSW2 395 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 LACRTQ9GZZ8 138 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 GCNT4Q9P109 453 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 SLC9A2Q9UBY0 812 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 V9GYY5 206 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 MYH11P35749 1972 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 BTNL10A8MVZ5 291 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 EXOC3O60645 756 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 PLEKP08567 350 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 FERP16591 822 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 FMO5P49326 533 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 CASP4P49662 377 aa18.88■□□□□ 0.61
TRAPPC11-204ENST00000505676 DGAT1O75907 488 aa18.87■□□□□ 0.61
TRAPPC11-204ENST00000505676 ERCC3P19447 782 aa18.87■□□□□ 0.61
TRAPPC11-204ENST00000505676 CYP27A1Q02318 531 aa18.87■□□□□ 0.61
TRAPPC11-204ENST00000505676 BFSP1Q12934 665 aa18.87■□□□□ 0.61
TRAPPC11-204ENST00000505676 DMP1Q13316 513 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC11-204ENST00000505676 USP50Q70EL3 339 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC11-204ENST00000505676 ERO1BQ86YB8 467 aa18.87■□□□□ 0.61
TRAPPC11-204ENST00000505676 NTPCRQ9BSD7 190 aaKnown RBP18.87■□□□□ 0.61
TRAPPC11-204ENST00000505676 BACH1O14867 736 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 IRF6O14896 467 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 TLR2O60603 784 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 HAUS6Q7Z4H7 955 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 ANKRD13AQ8IZ07 590 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 LRRN4CLQ8ND94 238 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 NOX5Q96PH1 765 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 RNF181Q9P0P0 153 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 A0A0G2JLL6 359 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 DDNO94850 711 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 ABL1P00519 1130 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 JAM2P57087 298 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 PLS1Q14651 629 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 UGCGQ16739 394 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 TEX35Q5T0J7 233 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 PRRT2Q7Z6L0 340 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 L3MBTL3Q96JM7 780 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 TRIM10Q9UDY6 481 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 PPME1Q9Y570 386 aa18.86■□□□□ 0.61
TRAPPC11-204ENST00000505676 RCCD1A6NED2 376 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 SLC25A27O95847 323 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 SLC9A1P19634 815 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 STAT1P42224 750 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 BRD3Q15059 726 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 IFI16Q16666 785 aaKnown RBP18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 TMCO3Q6UWJ1 677 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 USP37Q86T82 979 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 XXYLT1Q8NBI6 393 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 OGFRQ9NZT2 677 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 INTUQ9ULD6 942 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 ZC3H4Q9UPT8 1303 aaKnown RBP18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 TCP1P17987 556 aaKnown RBP18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 MCM3P25205 808 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 CYP2J2P51589 502 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 XKR3Q5GH77 459 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 ANKRD35Q8N283 1001 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 STK33Q9BYT3 514 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 FHDC1Q9C0D6 1143 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 SIX2Q9NPC8 291 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 GABBR1Q9UBS5 961 aa18.85■□□□□ 0.61
TRAPPC11-204ENST00000505676 IGSF9BQ9UPX0 1349 aa18.84■□□□□ 0.61
TRAPPC11-204ENST00000505676 LOC102724159A0A0B4J2E5 919 aa18.84■□□□□ 0.61
TRAPPC11-204ENST00000505676 RGS20O76081 388 aa18.84■□□□□ 0.61
TRAPPC11-204ENST00000505676 MYL7Q01449 175 aa18.84■□□□□ 0.61
TRAPPC11-204ENST00000505676 ITIH3Q06033 890 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms