RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 HES6Q96HZ4 224 aa17.42■□□□□ 0.38
DDX41-205ENST00000505081 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
DDX41-205ENST00000505081 HSD17B14Q9BPX1 270 aa17.42■□□□□ 0.38
DDX41-205ENST00000505081 POLR3CQ9BUI4 534 aaPredicted RBP17.42■□□□□ 0.38
DDX41-205ENST00000505081 GPR88Q9GZN0 384 aa17.42■□□□□ 0.38
DDX41-205ENST00000505081 KIF13BQ9NQT8 1826 aa17.42■□□□□ 0.38
DDX41-205ENST00000505081 GOLGA6L10A6NI86 522 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 TULP1O00294 542 aaPredicted RBP17.41■□□□□ 0.38
DDX41-205ENST00000505081 CIITAP33076 1130 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 PSMC2P35998 433 aaKnown RBP17.41■□□□□ 0.38
DDX41-205ENST00000505081 ECE1P42892 770 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 FMO5P49326 533 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 KIAA1755Q5JYT7 1200 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 AADACL2Q6P093 401 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 C1orf186Q6ZWK4 172 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 RASGEF1CQ8N431 466 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 MYCBPAPQ8TBZ2 947 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 CALR3Q96L12 384 aaKnown RBP17.41■□□□□ 0.38
DDX41-205ENST00000505081 CHORDC1Q9UHD1 332 aaPredicted RBP17.41■□□□□ 0.38
DDX41-205ENST00000505081 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 BHMG1C9JSJ3 638 aaPredicted RBP17.41■□□□□ 0.38
DDX41-205ENST00000505081 FOSP01100 380 aaPredicted RBP17.41■□□□□ 0.38
DDX41-205ENST00000505081 TMEM179Q6ZVK1 233 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 MAEAQ7L5Y9 396 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 OTOP1Q7RTM1 612 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 TDRD3Q9H7E2 651 aaKnown RBP17.41■□□□□ 0.38
DDX41-205ENST00000505081 EFCC1Q9HA90 598 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 OLFML3Q9NRN5 406 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 CNOT8Q9UFF9 292 aaKnown RBP17.41■□□□□ 0.38
DDX41-205ENST00000505081 AMFRQ9UKV5 643 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 LRCH2Q5VUJ6 765 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 FIZ1Q96SL8 496 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 THAP2Q9H0W7 228 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
DDX41-205ENST00000505081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.41■□□□□ 0.383e-7■■■■■ 208.8
DDX41-205ENST00000505081 DHX9Q08211 1270 aaKnown RBP17.4■□□□□ 0.38
DDX41-205ENST00000505081 LMBR1Q8WVP7 490 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 CAPN7Q9Y6W3 813 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 ANKRD31Q8N7Z5 1873 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 TISP43B9A030 160 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 DDX3YO15523 660 aaKnown RBP17.4■□□□□ 0.38
DDX41-205ENST00000505081 MMP14P50281 582 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 LRRC45Q96CN5 670 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.4■□□□□ 0.38
DDX41-205ENST00000505081 NOVA2Q9UNW9 492 aaKnown RBP17.4■□□□□ 0.38
DDX41-205ENST00000505081 COG5Q9UP83 839 aa17.4■□□□□ 0.38
DDX41-205ENST00000505081 A0A0A6YYK5 440 aaPredicted RBP17.39■□□□□ 0.37
DDX41-205ENST00000505081 CCDC188H7C350 402 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 B4GALNT4Q76KP1 1039 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 TMC3Q7Z5M5 1100 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 GLG1Q92896 1179 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 STK33Q9BYT3 514 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 INTS2Q9H0H0 1204 aaKnown RBP17.39■□□□□ 0.37
DDX41-205ENST00000505081 PARVGQ9HBI0 331 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 GTPBP10A4D1E9 387 aaKnown RBP17.39■□□□□ 0.37
DDX41-205ENST00000505081 ODF2Q5BJF6 829 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 LRIG3Q6UXM1 1119 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 SYCE1Q8N0S2 351 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 OTUD6BQ8N6M0 293 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 GMCL1P1Q8NEA9 526 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 GMCL1Q96IK5 515 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 AGPAT3Q9NRZ7 376 aa17.39■□□□□ 0.37
DDX41-205ENST00000505081 A6NNZ2 444 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 GAP43P17677 238 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 DLG4P78352 724 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 POU5F1Q01860 360 aaKnown RBP17.38■□□□□ 0.37
DDX41-205ENST00000505081 TUBB8Q3ZCM7 444 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 RNF187Q5TA31 235 aaPredicted RBP17.38■□□□□ 0.37
DDX41-205ENST00000505081 PHLDB3Q6NSJ2 640 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 CHADLQ6NUI6 762 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 ZNF720Q7Z2F6 126 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 FAM178BQ8IXR5 827 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 SLC20A1Q8WUM9 679 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 ZNF622Q969S3 477 aaKnown RBP eCLIP17.38■□□□□ 0.371e-8■■□□□ 13.5
DDX41-205ENST00000505081 PKD2L1Q9P0L9 805 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 ATP8A1Q9Y2Q0 1164 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 DDX39AO00148 427 aaKnown RBP17.38■□□□□ 0.37
DDX41-205ENST00000505081 FOXN3O00409 490 aaPredicted RBP17.38■□□□□ 0.37
DDX41-205ENST00000505081 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
DDX41-205ENST00000505081 PSMD10O75832 226 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 TRIM37O94972 964 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 PPATQ06203 517 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 IFT88Q13099 833 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 ODR4Q5SWX8 454 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 ICE2Q659A1 982 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 ATP8B4Q8TF62 1192 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 CTNNBL1Q8WYA6 563 aaPredicted RBP17.38■□□□□ 0.37
DDX41-205ENST00000505081 RFFLQ8WZ73 363 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 ALG3Q92685 438 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 SYT11Q9BT88 431 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 IDI2Q9BXS1 227 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 PCIF1Q9H4Z3 704 aa17.38■□□□□ 0.37
DDX41-205ENST00000505081 NRXN2Q9P2S2 1712 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms