RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TMEM60Q9H2L4 133 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 ELAC1Q9H777 363 aaKnown RBP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 BMP2KQ9NSY1 1161 aaPredicted RBP10.96□□□□□ -0.65
NR1I3-220ENST00000505005 RGL1Q9NZL6 768 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 LRFN2Q9ULH4 789 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 PADI3Q9ULW8 664 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 COL4A3BPQ9Y5P4 624 aa10.96□□□□□ -0.65
NR1I3-220ENST00000505005 POTEMA6NI47 508 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 GJB5O95377 273 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 EOMESO95936 686 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 GHRP10912 638 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 DNAJB2P25686 324 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 RARRES1P49788 294 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 GPC3P51654 580 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 EFNA5P52803 228 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 SMTNP53814 917 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 EPHB4P54760 987 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 NUCB2P80303 420 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
NR1I3-220ENST00000505005 HIC1Q14526 733 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 LPIN1Q14693 890 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 EMC2Q15006 297 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 UGCGQ16739 394 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 CSPP1Q1MSJ5 1256 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 HYIQ5T013 277 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 RUFY4Q6ZNE9 571 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 ZBTB8OSQ8IWT0 167 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 LINC01465Q8N7H1 131 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 KCNG4Q8TDN1 519 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 TIFAQ96CG3 184 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 PRIMPOLQ96LW4 560 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 DRC1Q96MC2 740 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 UIMC1Q96RL1 719 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 TRAIPQ9BWF2 469 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
NR1I3-220ENST00000505005 UBN1Q9NPG3 1134 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 STK39Q9UEW8 545 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 GINS2Q9Y248 185 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 PCDHB7Q9Y5E2 793 aa10.95□□□□□ -0.66
NR1I3-220ENST00000505005 SRPRBQ9Y5M8 271 aaKnown RBP10.95□□□□□ -0.66
NR1I3-220ENST00000505005 TRIOBPQ9H2D6 2365 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 VWA3AA6NCI4 1184 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 PPP6R2O75170 966 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 GPR32O75388 356 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 ERLIN2O94905 339 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 STBD1O95210 358 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 YEATS4O95619 227 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 EYA4O95677 639 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 ZSCAN22P10073 491 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-220ENST00000505005 DARSP14868 501 aaKnown RBP10.94□□□□□ -0.66
NR1I3-220ENST00000505005 CYP11B2P19099 503 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 SLC39A14Q15043 492 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 STK38Q15208 465 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 NAALADL2Q58DX5 795 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 FERMT3Q86UX7 667 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 RHPN2Q8IUC4 686 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 MYOCDQ8IZQ8 938 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 TRAPPC12Q8WVT3 735 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 GJA10Q969M2 543 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 PGBD4Q96DM1 585 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 GAS2L1Q99501 681 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-220ENST00000505005 CCSER1Q9C0I3 900 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 AAASQ9NRG9 546 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 RGS18Q9NS28 235 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 KIAA1024Q9UPX6 916 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 MTMR6Q9Y217 621 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 TELO2Q9Y4R8 837 aa10.94□□□□□ -0.66
NR1I3-220ENST00000505005 ENPP3O14638 875 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 RB1P06400 928 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 SPATA31C1P0DKV0 1188 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 NAMPTP43490 491 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 SARSP49591 514 aaKnown RBP10.93□□□□□ -0.66
NR1I3-220ENST00000505005 CLCN3P51790 818 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 AMPD3Q01432 767 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 KIZQ2M2Z5 673 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 PADI6Q6TGC4 694 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 CCDC73Q6ZRK6 1079 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 CABP7Q86V35 215 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 KRI1Q8N9T8 703 aaKnown RBP10.93□□□□□ -0.66
NR1I3-220ENST00000505005 ZNF579Q8NAF0 562 aaKnown RBP10.93□□□□□ -0.66
NR1I3-220ENST00000505005 PRPF31Q8WWY3 499 aaKnown RBP10.93□□□□□ -0.66
NR1I3-220ENST00000505005 WNT8BQ93098 351 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 CEP89Q96ST8 783 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 YME1L1Q96TA2 773 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 PBX4Q9BYU1 374 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 ADAMTS10Q9H324 1103 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 CUEDC2Q9H467 287 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 ZNF576Q9H609 170 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 ERVK-5Q9HDB9 667 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 DDX19AQ9NUU7 478 aaKnown RBP10.93□□□□□ -0.66
NR1I3-220ENST00000505005 PRMT7Q9NVM4 692 aaPredicted RBP10.93□□□□□ -0.66
NR1I3-220ENST00000505005 LMCD1Q9NZU5 365 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 LARSQ9P2J5 1176 aaKnown RBP10.93□□□□□ -0.66
NR1I3-220ENST00000505005 STK17AQ9UEE5 414 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 ST3GAL5Q9UNP4 418 aa10.93□□□□□ -0.66
NR1I3-220ENST00000505005 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.93□□□□□ -0.66
NR1I3-220ENST00000505005 SCN5AQ14524 2016 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 FSD2A1L4K1 749 aa10.92□□□□□ -0.66
NR1I3-220ENST00000505005 GTPBP6O43824 516 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms