RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 PLPPR4Q7Z2D5 763 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 GPR149Q86SP6 731 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 ZNF598Q86UK7 904 aaKnown RBP6.92□□□□□ -1.3
GYPB-204ENST00000504951 ZNF589Q86UQ0 364 aaPredicted RBP6.92□□□□□ -1.3
GYPB-204ENST00000504951 NLRX1Q86UT6 975 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 PPFIBP1Q86W92 1011 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 TRIM50Q86XT4 487 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 THNSL1Q8IYQ7 743 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 KIAA2013Q8IYS2 634 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 KCNG4Q8TDN1 519 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 NELL1Q92832 810 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 EVI5LQ96CN4 794 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 TCF25Q9BQ70 676 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 RTKNQ9BST9 563 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 CPVLQ9H3G5 476 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 KAT14Q9H8E8 782 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 KCNK12Q9HB15 430 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 ERVK-5Q9HDB9 667 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 SPG21Q9NZD8 308 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 BAHCC1Q9P281 2608 aa6.92□□□□□ -1.3
GYPB-204ENST00000504951 ATRXP46100 2492 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 TBKBP1A7MCY6 615 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 SPTLC1O15269 473 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 PPP1R11O60927 126 aaPredicted RBP6.91□□□□□ -1.3
GYPB-204ENST00000504951 PPFIA3O75145 1194 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 ASGR2P07307 311 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 SP9P0CG40 484 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 INSRRP14616 1297 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 KCNA2P16389 499 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 SMARCA1P28370 1054 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 TCF7P36402 384 aaPredicted RBP6.91□□□□□ -1.3
GYPB-204ENST00000504951 PDE1AP54750 535 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 HAND2P61296 217 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 ST3GAL2Q16842 350 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 PAN2Q504Q3 1202 aaKnown RBP6.91□□□□□ -1.3
GYPB-204ENST00000504951 RRP12Q5JTH9 1297 aaKnown RBP6.91□□□□□ -1.3
GYPB-204ENST00000504951 FAM102BQ5T8I3 360 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 PLPP4Q5VZY2 271 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 BLOC1S3Q6QNY0 202 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 TMC7Q7Z402 723 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 TBC1D10CQ8IV04 446 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 C1orf210Q8IVY1 113 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 SLC39A11Q8N1S5 342 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 ENAHQ8N8S7 591 aaPredicted RBP6.91□□□□□ -1.3
GYPB-204ENST00000504951 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 CMASQ8NFW8 434 aaPredicted RBP6.91□□□□□ -1.3
GYPB-204ENST00000504951 SLC22A17Q8WUG5 538 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 GLG1Q92896 1179 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 ZNF558Q96NG5 402 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 CASD1Q96PB1 797 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 ZSCAN10Q96SZ4 725 aaPredicted RBP6.91□□□□□ -1.3
GYPB-204ENST00000504951 OSBPL6Q9BZF3 934 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 ATP6V0A4Q9HBG4 840 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 ENTPD7Q9NQZ7 604 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 EPS15L1Q9UBC2 864 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 FBXO4Q9UKT5 387 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 LAMA4Q16363 1823 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 GPR179Q6PRD1 2367 aa6.91□□□□□ -1.3
GYPB-204ENST00000504951 MYH6P13533 1939 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 PNMA6FA0A0J9YX94 578 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 KLRF2D3W0D1 207 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 MGEA5O60502 916 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 RPS6KA5O75582 802 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 ATG7O95352 703 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 TGM1P22735 817 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 HOXA13P31271 388 aaPredicted RBP6.9□□□□□ -1.3
GYPB-204ENST00000504951 MAGEA9P43362 315 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 GATMP50440 423 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 MFAP1P55081 439 aaKnown RBP6.9□□□□□ -1.3
GYPB-204ENST00000504951 KRT76Q01546 638 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 LMNB2Q03252 620 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.3
GYPB-204ENST00000504951 SPOUT1Q5T280 376 aaKnown RBP6.9□□□□□ -1.3
GYPB-204ENST00000504951 UTP14CQ5TAP6 766 aaKnown RBP6.9□□□□□ -1.3
GYPB-204ENST00000504951 ANKRD45Q5TZF3 282 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 LRRC55Q6ZSA7 311 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 SIX5Q8N196 739 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 LRRC43Q8N309 656 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 ZBTB44Q8NCP5 570 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 ZNF775Q96BV0 537 aaPredicted RBP6.9□□□□□ -1.3
GYPB-204ENST00000504951 ADAM2Q99965 735 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 ZKSCAN3Q9BRR0 538 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 SMOC2Q9H3U7 446 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 VAT1LQ9HCJ6 419 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 SLC2A4RGQ9NR83 387 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 TSHZ2Q9NRE2 1034 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 ZSWIM5Q9P217 1185 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 MAD2L2Q9UI95 211 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 DBR1Q9UK59 544 aaKnown RBP6.9□□□□□ -1.3
GYPB-204ENST00000504951 ST3GAL5Q9UNP4 418 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 SUPT16HQ9Y5B9 1047 aaKnown RBP6.9□□□□□ -1.3
GYPB-204ENST00000504951 PCDHGA2Q9Y5H1 932 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 CACNA1IQ9P0X4 2223 aa6.9□□□□□ -1.3
GYPB-204ENST00000504951 SPTBN2O15020 2390 aa6.9□□□□□ -1.31
GYPB-204ENST00000504951 MAP1BP46821 2468 aaKnown RBP6.9□□□□□ -1.31
GYPB-204ENST00000504951 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.31
GYPB-204ENST00000504951 LOXHD1Q8IVV2 1947 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 FAM208BQ5VWN6 2430 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 IGKV6D-21A0A0A0MT36 114 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms