RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TCHHQ07283 1943 aa10.46□□□□□ -0.73
PDLIM5-207ENST00000503974 CNTNAP5Q8WYK1 1306 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 DPPA5A6NC42 116 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 AKR1B10O60218 316 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 FLOT1O75955 427 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 PLEKHA8P1O95397 391 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 ANP32DO95626 131 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 FDX1P10109 184 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 TROVE2P10155 538 aaKnown RBP eCLIP10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 CDC25CP30307 473 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 CAMK2BQ13554 666 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 WHAMMP3Q1A5X7 153 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 SYDE2Q5VT97 1194 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 OTUD7BQ6GQQ9 843 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 MAATS1Q7Z4T9 603 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 SRBD1Q8N5C6 995 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 NR1H4Q96RI1 486 aaPredicted RBP10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 PARK7Q99497 189 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 P2RX7Q99572 595 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 SUGCTQ9HAC7 445 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 NOD2Q9HC29 1040 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 HESX1Q9UBX0 185 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 CIDEBQ9UHD4 219 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.74
PDLIM5-207ENST00000503974 LRRD1A4D1F6 860 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 A6NNZ2 444 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 LRRIQ3A6PVS8 624 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ATP2A1O14983 1001 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 KDM1AO60341 852 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 IFNAR1P17181 557 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 MATR3P43243 847 aaKnown RBP eCLIP10.45□□□□□ -0.741e-6■■■□□ 17.1
PDLIM5-207ENST00000503974 HERVK_113P62684 666 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 TUBB8Q3ZCM7 444 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ANO6Q4KMQ2 910 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 NEK10Q6ZWH5 1172 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 RSPH3Q86UC2 560 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 EXOC3L1Q86VI1 746 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ERICH1Q86X53 443 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 CCDC155Q8N6L0 562 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ATG4CQ96DT6 458 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 SPATA32Q96LK8 384 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 RSPH9Q9H1X1 276 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 NRDE2Q9H7Z3 1164 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 SSX2IPQ9Y2D8 614 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 TRIM43BA6NCK2 446 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 VWA5AO00534 786 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 CA12O43570 354 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ATP6V1G2O95670 118 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 VIMP08670 466 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 CYP2C8P10632 490 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ENDOUP21128 410 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 SLC16A2P36021 539 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 CTAG1AP78358 180 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 MXRA7P84157 204 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ADGRF4Q8IZF3 695 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 CCHCR1Q8TD31 782 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 TCHPQ9BT92 498 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 MRPL46Q9H2W6 279 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 CPVLQ9H3G5 476 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 JMJD4Q9H9V9 463 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 SLC38A10Q9HBR0 1119 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 NCOA5Q9HCD5 579 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 MORF4L1Q9UBU8 362 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 SH3GLB1Q9Y371 365 aa10.45□□□□□ -0.74
PDLIM5-207ENST00000503974 ZNF536O15090 1300 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 A0A1B0GVL5 298 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 TARSL2A2RTX5 802 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 GOLGA6L4A6NEF3 574 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 TBKBP1A7MCY6 615 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 CNMDO75829 334 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 ZNF202O95125 648 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 MLH1P40692 756 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 OAZ1P54368 228 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 TUBB4BP68371 445 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 STK3Q13188 491 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 XRCC4Q13426 336 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 TAF1CQ15572 869 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 TMEM53Q6P2H8 277 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 DEPTORQ8TB45 409 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 NDNQ99608 321 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 OSBPL1AQ9BXW6 950 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 RNF26Q9BY78 433 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 SAGE1Q9NXZ1 904 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 ZNF214Q9UL59 606 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 R3HDM2Q9Y2K5 976 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 DIS3Q9Y2L1 958 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 MYH6P13533 1939 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 STK36Q9NRP7 1315 aa10.44□□□□□ -0.74
PDLIM5-207ENST00000503974 BICDL2A1A5D9 508 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 HTR3EA5X5Y0 456 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 BECN2A8MW95 431 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 NDUFAB1O14561 156 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 TLR2O60603 784 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 CTDNEP1O95476 244 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 SSBP05455 408 aaKnown RBP eCLIP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 TUBBP07437 444 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 GNGT1P63211 74 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 LBRQ14739 615 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms