RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 RHPN2Q8IUC4 686 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 RPUSD2Q8IZ73 545 aaKnown RBP18.35■□□□□ 0.53
SCLT1-205ENST00000503401 IPO9Q96P70 1041 aaKnown RBP18.35■□□□□ 0.53
SCLT1-205ENST00000503401 JPH2Q9BR39 696 aaPredicted RBP18.35■□□□□ 0.53
SCLT1-205ENST00000503401 PANK2Q9BZ23 570 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 GPRC5CQ9NQ84 441 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 CUTAO60888 179 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 RPLP2P05387 115 aaKnown RBP18.34■□□□□ 0.53
SCLT1-205ENST00000503401 SSBP05455 408 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCLT1-205ENST00000503401 GPC3P51654 580 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 LPIN1Q14693 890 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 SHHQ15465 462 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 TPRNQ4KMQ1 711 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 FBXO47Q5MNV8 452 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 SHC4Q6S5L8 630 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 OTOP2Q7RTS6 562 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 TMEM40Q8WWA1 233 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 A0A087X0B3 334 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 CXCL10P02778 98 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 BMP8BP34820 402 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 TXLNAP40222 546 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 DHX8Q14562 1220 aaKnown RBP18.34■□□□□ 0.53
SCLT1-205ENST00000503401 EXOC8Q8IYI6 725 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 PRPF31Q8WWY3 499 aaKnown RBP18.34■□□□□ 0.53
SCLT1-205ENST00000503401 NLRP7Q8WX94 980 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 NLRP4Q96MN2 994 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 SCLT1Q96NL6 688 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 RUSC1Q9BVN2 902 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 ADAMTS10Q9H324 1103 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 AGO3Q9H9G7 860 aaKnown RBP18.34■□□□□ 0.53
SCLT1-205ENST00000503401 BLOC1S4Q9NUP1 217 aa18.34■□□□□ 0.53
SCLT1-205ENST00000503401 CSDE1O75534 798 aaKnown RBP18.33■□□□□ 0.52
SCLT1-205ENST00000503401 PARNO95453 639 aaKnown RBP18.33■□□□□ 0.52
SCLT1-205ENST00000503401 FGBP02675 491 aa18.33■□□□□ 0.52
SCLT1-205ENST00000503401 PLA2G4BP0C869 781 aa18.33■□□□□ 0.52
SCLT1-205ENST00000503401 FAM102BQ5T8I3 360 aa18.33■□□□□ 0.52
SCLT1-205ENST00000503401 PDILTQ8N807 584 aa18.33■□□□□ 0.52
SCLT1-205ENST00000503401 DBF4BQ8NFT6 615 aa18.33■□□□□ 0.52
SCLT1-205ENST00000503401 ASAP3Q8TDY4 903 aa18.33■□□□□ 0.52
SCLT1-205ENST00000503401 PSPC1Q8WXF1 523 aaKnown RBP18.33■□□□□ 0.52
SCLT1-205ENST00000503401 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.52
SCLT1-205ENST00000503401 COL4A3BPQ9Y5P4 624 aa18.33■□□□□ 0.52
SCLT1-205ENST00000503401 MICAL3Q7RTP6 2002 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 MYH11P35749 1972 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 A0A087WZ62 844 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 SLC26A4O43511 780 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 PFKMP08237 780 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 SRGAP2CP0DJJ0 459 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 CYP11B2P19099 503 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 CD52P31358 61 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 CRYBB1P53674 252 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 SLC12A3P55017 1021 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 RAD51AP2Q09MP3 1159 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 LAMTOR4Q0VGL1 99 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 MCM6Q14566 821 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 PLEKHG4Q58EX7 1191 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 RINT1Q6NUQ1 792 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 PSRC1Q6PGN9 363 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 TCP11Q8WWU5 503 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 FDXACB1Q9BRP7 624 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 SCAND2PQ9GZW5 306 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 POLR3FQ9H1D9 316 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 CXXC1Q9P0U4 656 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 CCDC39Q9UFE4 941 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 NOC2LQ9Y3T9 749 aaKnown RBP18.32■□□□□ 0.52
SCLT1-205ENST00000503401 SZT2Q5T011 3432 aa18.32■□□□□ 0.52
SCLT1-205ENST00000503401 ARL2P36404 184 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 RRAGBQ5VZM2 374 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 TSHZ1Q6ZSZ6 1077 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 TDHQ8IZJ6 230 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 SYT2Q8N9I0 419 aaPredicted RBP18.31■□□□□ 0.52
SCLT1-205ENST00000503401 MCPH1Q8NEM0 835 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 RAD54LQ92698 747 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 NPHP3-ACAD11A0A0J9YXS1 232 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 ZBBXA8MT70 800 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 FGFR4P22455 802 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 NAALADL2Q58DX5 795 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 CNKSR3Q6P9H4 555 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 C1orf186Q6ZWK4 172 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 RNF149Q8NC42 400 aa18.31■□□□□ 0.52
SCLT1-205ENST00000503401 RNPC3Q96LT9 517 aaKnown RBP18.31■□□□□ 0.52
SCLT1-205ENST00000503401 RPS6KA5O75582 802 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 GLRA2P23416 452 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 NFX1Q12986 1120 aaKnown RBP18.3■□□□□ 0.52
SCLT1-205ENST00000503401 PAK2Q13177 524 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 CAPSQ13938 189 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 RESP18Q5W5W9 173 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 BSNDQ8WZ55 320 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 SEPT8Q92599 483 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 LARP4BQ92615 738 aaKnown RBP18.3■□□□□ 0.52
SCLT1-205ENST00000503401 IFT122Q9HBG6 1241 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 PADI3Q9ULW8 664 aa18.3■□□□□ 0.52
SCLT1-205ENST00000503401 PTPRSQ13332 1948 aa18.29■□□□□ 0.52
SCLT1-205ENST00000503401 ACTN1P12814 892 aa18.29■□□□□ 0.52
SCLT1-205ENST00000503401 DARSP14868 501 aaKnown RBP18.29■□□□□ 0.52
SCLT1-205ENST00000503401 EIF4BP23588 611 aaKnown RBP18.29■□□□□ 0.52
SCLT1-205ENST00000503401 STAT6P42226 847 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms