RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 RASSF8Q8NHQ8 419 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 TCP11Q8WWU5 503 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 PSPC1Q8WXF1 523 aaKnown RBP18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 APBB2Q92870 758 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 LRCH3Q96II8 777 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 NLRP4Q96MN2 994 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 CLIC6Q96NY7 704 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 CSRNP2Q9H175 543 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 BHMT2Q9H2M3 363 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 ADAMTS10Q9H324 1103 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 XPNPEP1Q9NQW7 623 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 PADI3Q9ULW8 664 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 DNM3Q9UQ16 869 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 ZDHHC9Q9Y397 364 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 COL4A3BPQ9Y5P4 624 aa18.71■□□□□ 0.59
TSPAN17-203ENST00000503030 A0A087WZ62 844 aa18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 GAS2O43903 313 aaKnown RBP18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 ATP2A2P16615 1042 aaKnown RBP18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 GRB10Q13322 594 aa18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 PADI6Q6TGC4 694 aa18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 KCNK18Q7Z418 384 aa18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 LINC00301Q8NCQ3 95 aa18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 PRPF31Q8WWY3 499 aaKnown RBP18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 CALML4Q96GE6 196 aa18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 PNMA5Q96PV4 448 aa18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 FDXACB1Q9BRP7 624 aaPredicted RBP18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 SRPRBQ9Y5M8 271 aaKnown RBP18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 SQORQ9Y6N5 450 aa18.7■□□□□ 0.58
TSPAN17-203ENST00000503030 EFCAB14O75071 495 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 SRGAP2CP0DJJ0 459 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 FXR1P51114 621 aaKnown RBP eCLIP18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 DEFB103AP81534 67 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 CDC42EP1Q00587 391 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 DNM1Q05193 864 aaKnown RBP18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 LAMTOR4Q0VGL1 99 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 TMCO2Q7Z6W1 182 aaPredicted RBP18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 ZNF710Q8N1W2 664 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 KRI1Q8N9T8 703 aaKnown RBP18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 GCOM2Q9BZD3 368 aaPredicted RBP18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 NT5C3AQ9H0P0 336 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 POLR3FQ9H1D9 316 aaPredicted RBP18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 ST3GAL5Q9UNP4 418 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 MICAL3Q7RTP6 2002 aa18.69■□□□□ 0.58
TSPAN17-203ENST00000503030 SPTLC2O15270 562 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 CSDE1O75534 798 aaKnown RBP18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 YEATS4O95619 227 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 EYA4O95677 639 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 AMHP03971 560 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 SSBP05455 408 aaKnown RBP eCLIP18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 FGFR4P22455 802 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 EIF4BP23588 611 aaKnown RBP18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 RABGGTBP53611 331 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 HYIQ5T013 277 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 FAM102BQ5T8I3 360 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 USP49Q70CQ1 688 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 ZNF410Q86VK4 478 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 FAM228AQ86W67 206 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 MYOCDQ8IZQ8 938 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 MCPH1Q8NEM0 835 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 EPSTI1Q96J88 318 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 SLC9A7Q96T83 725 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 ERVK-5Q9HDB9 667 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 GPRC5CQ9NQ84 441 aa18.68■□□□□ 0.58
TSPAN17-203ENST00000503030 GPR182O15218 404 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 DARSP14868 501 aaKnown RBP18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 CYP11B2P19099 503 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 IBSPP21815 317 aaPredicted RBP18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 SMAD3P84022 425 aaKnown RBP18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 KARSQ15046 597 aaKnown RBP18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 TMEM119Q4V9L6 283 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 ODR4Q5SWX8 454 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 FAM117BQ6P1L5 589 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 RNF149Q8NC42 400 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 ASAP3Q8TDY4 903 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 SYMPKQ92797 1274 aaKnown RBP18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 CHAMP1Q96JM3 812 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 CFAP45Q9UL16 551 aa18.67■□□□□ 0.58
TSPAN17-203ENST00000503030 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 ASAP2O43150 1006 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 SLC26A4O43511 780 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 PLCG1P19174 1290 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 ARL2P36404 184 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 TXLNAP40222 546 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 PBX2P40425 430 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 MXD4Q14582 209 aaPredicted RBP18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 ATL3Q6DD88 541 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 HERC6Q8IVU3 1022 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 PHOSPHO2Q8TCD6 241 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 ZBED2Q9BTP6 218 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 FTHL17Q9BXU8 183 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 TMX1Q9H3N1 280 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 POLD4Q9HCU8 107 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 PTPRSQ13332 1948 aa18.66■□□□□ 0.58
TSPAN17-203ENST00000503030 ENPP3O14638 875 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms