RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 FAM167AQ96KS9 214 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
SNCA-207ENST00000502987 ATP6V0A4Q9HBG4 840 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 DISC1Q9NRI5 854 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 RGS18Q9NS28 235 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 C1orf112Q9NSG2 853 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 PCDHGA4Q9Y5G9 962 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 CYP46A1Q9Y6A2 500 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 PLXNA4Q9HCM2 1894 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 ZBTB42B2RXF5 422 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 LINC01565O15544 149 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 GPR37L1O60883 481 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 PPP1R37O75864 691 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
SNCA-207ENST00000502987 DNAJB1P25685 340 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 LTBRP36941 435 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 NRIP1P48552 1158 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 USP11P51784 963 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 NLRP11P59045 1033 aaKnown RBP12.11□□□□□ -0.47
SNCA-207ENST00000502987 DLX2Q07687 328 aaPredicted RBP12.11□□□□□ -0.47
SNCA-207ENST00000502987 STK3Q13188 491 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 NTRK3Q16288 839 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 LRCH2Q5VUJ6 765 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 CPLX2Q6PUV4 134 aaKnown RBP12.11□□□□□ -0.47
SNCA-207ENST00000502987 THNSL1Q8IYQ7 743 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 LRRC71Q8N4P6 559 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 TMEM40Q8WWA1 233 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 ZNF668Q96K58 619 aaPredicted RBP12.11□□□□□ -0.47
SNCA-207ENST00000502987 TEKT3Q9BXF9 490 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
SNCA-207ENST00000502987 TLE6Q9H808 572 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 PRKAG3Q9UGI9 489 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 CD207Q9UJ71 328 aa12.11□□□□□ -0.47
SNCA-207ENST00000502987 MSH4O15457 936 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 OATP04181 439 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 CIITAP33076 1130 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 ADAM15Q13444 863 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 CTC1Q2NKJ3 1217 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 FAM43BQ6ZT52 329 aaPredicted RBP12.1□□□□□ -0.47
SNCA-207ENST00000502987 MIER3Q7Z3K6 550 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 FAM228AQ86W67 206 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 ABI1Q8IZP0 508 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 CRIPAKQ8N1N5 446 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 FBXL16Q8N461 479 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 RNF169Q8NCN4 708 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 TBCKQ8TEA7 893 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 GJA10Q969M2 543 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 C22orf23Q9BZE7 217 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 SH3GLB2Q9NR46 395 aa12.1□□□□□ -0.47
SNCA-207ENST00000502987 TYW1Q9NV66 732 aaKnown RBP12.1□□□□□ -0.47
SNCA-207ENST00000502987 TRIOO75962 3097 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 NID2Q14112 1375 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 C9IYK1 514 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 MBTPS2O43462 519 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 DCXO43602 365 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 GPR32O75388 356 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 DEXIO95424 95 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 FGFR1P11362 822 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 SFNP31947 248 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 IRS1P35568 1242 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 PLA2G5P39877 138 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 JAK3P52333 1124 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 PRKCEQ02156 737 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 ZP2Q05996 745 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 TBC1D8BQ0IIM8 1120 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 CAMK1Q14012 370 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 COL19A1Q14993 1142 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 ADHFE1Q8IWW8 467 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 NLRP7Q8WX94 980 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 POP1Q99575 1024 aaKnown RBP12.09□□□□□ -0.47
SNCA-207ENST00000502987 RIT2Q99578 217 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 SLKQ9H2G2 1235 aaPredicted RBP12.09□□□□□ -0.47
SNCA-207ENST00000502987 UNC45AQ9H3U1 944 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 TMEM161AQ9NX61 479 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
SNCA-207ENST00000502987 PCDHA4Q9UN74 947 aa12.09□□□□□ -0.47
SNCA-207ENST00000502987 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 PER2O15055 1255 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 HOXA2O43364 376 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 MARCH6O60337 910 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 TBX10O75333 385 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 FGF18O76093 207 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 EIF4BP23588 611 aaKnown RBP12.08□□□□□ -0.48
SNCA-207ENST00000502987 DNM2P50570 870 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 UBE3AQ05086 875 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 SMAD4Q13485 552 aaKnown RBP12.08□□□□□ -0.48
SNCA-207ENST00000502987 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.48
SNCA-207ENST00000502987 SMAD2Q15796 467 aaKnown RBP12.08□□□□□ -0.48
SNCA-207ENST00000502987 MTERF2Q49AM1 385 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 BLIDQ8IZY5 108 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 EFHBQ8N7U6 833 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 SLC5A5Q92911 643 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 LENG9Q96B70 501 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 ZNF274Q96GC6 653 aaPredicted RBP12.08□□□□□ -0.48
SNCA-207ENST00000502987 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
SNCA-207ENST00000502987 PDRG1Q9NUG6 133 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms