RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ADD1P35611 737 aaKnown RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 MRE11P49959 708 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 RAB27AP51159 221 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 GPC3P51654 580 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 POLGP54098 1239 aaPredicted RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 PTPN5P54829 565 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 NLRP11P59045 1033 aaKnown RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 ERVFC1P60507 584 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 KRT17Q04695 432 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 BMS1Q14692 1282 aaKnown RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 PCBP1Q15365 356 aaKnown RBP eCLIP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 TMEM266Q2M3C6 531 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 Q4G0T1 1027 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 EFCAB12Q6NXP0 572 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 ANKRD54Q6NXT1 300 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 KCNT2Q6UVM3 1135 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 EP400NLQ6ZTU2 488 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 ZNF410Q86VK4 478 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 ECHDC2Q86YB7 292 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 EXOC8Q8IYI6 725 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 UBALD2Q8IYN6 164 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 THNSL1Q8IYQ7 743 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 FBXL6Q8N531 539 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 MRPL43Q8N983 215 aaKnown RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 VN1R2Q8NFZ6 395 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 CASP10Q92851 521 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 SLC5A5Q92911 643 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 ZBTB10Q96DT7 871 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 PGBD1Q96JS3 809 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 ZNF558Q96NG5 402 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 CEP89Q96ST8 783 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 OSMRQ99650 979 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 JPH2Q9BR39 696 aaPredicted RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 RHOBTB2Q9BYZ6 727 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 INO80BQ9C086 356 aaPredicted RBP6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 DISC1Q9NRI5 854 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 RNF19AQ9NV58 838 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 TMEM260Q9NX78 707 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 GABBR1Q9UBS5 961 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 NR2E1Q9Y466 385 aa6.9□□□□□ -1.3
LSM3P4-201ENST00000502948 TRIOO75962 3097 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 TMEM221A6NGB7 291 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 M0R296 226 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 MSH4O15457 936 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 EDIL3O43854 480 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 ZNF862O60290 1169 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 MAFO75444 373 aaPredicted RBP6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 PSMD10O75832 226 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 PAPLNO95428 1278 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 PSMA5P28066 241 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 GATMP50440 423 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 SMC1AQ14683 1233 aaKnown RBP6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 PTPN21Q16825 1174 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 KIZQ2M2Z5 673 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 TPRNQ4KMQ1 711 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 XKR3Q5GH77 459 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 JAKMIP3Q5VZ66 844 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 SYCE2Q6PIF2 218 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 BLOC1S2Q6QNY1 142 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 LRRC55Q6ZSA7 311 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 Q6ZUG5 572 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 ALYREFQ86V81 257 aaKnown RBP6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 SUGP1Q8IWZ8 645 aaKnown RBP6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 CKAP2LQ8IYA6 745 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 ABI1Q8IZP0 508 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 SLC39A11Q8N1S5 342 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 METTL13Q8N6R0 699 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 DAGLBQ8NCG7 672 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 MICAL1Q8TDZ2 1067 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 PBXIP1Q96AQ6 731 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 YTHDC1Q96MU7 727 aaKnown RBP6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 TCF25Q9BQ70 676 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 ADAM7Q9H2U9 754 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 SPG21Q9NZD8 308 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 BARX2Q9UMQ3 279 aaPredicted RBP6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 WDFY4Q6ZS81 3184 aa6.89□□□□□ -1.31
LSM3P4-201ENST00000502948 MYO10Q9HD67 2058 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 ARID2Q68CP9 1835 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 C2orf71A6NGG8 1288 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 PROB1E7EW31 1015 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 M0R2N6 131 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 DDX39AO00148 427 aaKnown RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 GAS2O43903 313 aaKnown RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 DKC1O60832 514 aaKnown RBP eCLIP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 STBD1O95210 358 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 VTNP04004 478 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 SFPQP23246 707 aaKnown RBP eCLIP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 RPS6KB1P23443 525 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 MTHFRP42898 656 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 PHKA2P46019 1235 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 ALDH7A1P49419 539 aaKnown RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 DNM2P50570 870 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 FGD1P98174 961 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 AKAP17AQ02040 695 aaKnown RBP6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 PRKCEQ02156 737 aa6.88□□□□□ -1.31
LSM3P4-201ENST00000502948 TBC1D8BQ0IIM8 1120 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms