RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 ANO2Q9NQ90 1003 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 SPG21Q9NZD8 308 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 AKT3Q9Y243 479 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 C2CD4DB7Z1M9 353 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 HOXA2O43364 376 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 ZSCAN20P17040 1043 aaPredicted RBP16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 KRT17Q04695 432 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 CLLU1OSQ5K130 101 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 ZNF746Q6NUN9 644 aaPredicted RBP16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 ABI1Q8IZP0 508 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 LRRC43Q8N309 656 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 LRRC71Q8N4P6 559 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 LINC01465Q8N7H1 131 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 RNF169Q8NCN4 708 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 CASP10Q92851 521 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 GLT8D2Q9H1C3 349 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 SMOC2Q9H3U7 446 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 TBC1D22BQ9NU19 505 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 GABBR1Q9UBS5 961 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 NR2E1Q9Y466 385 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 HCFC2Q9Y5Z7 792 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 WDR87Q6ZQQ6 2873 aa16.61■□□□□ 0.25
SEC61A1-207ENST00000498837 C2orf71A6NGG8 1288 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 NT5C1B-RDH14C9J2C7 533 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 BRD1O95696 1058 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 PSAPP07602 524 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 WEE2P0C1S8 567 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 FGFR4P22455 802 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 EIF4BP23588 611 aaKnown RBP16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 PPM1AP35813 382 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 SLC39A11Q8N1S5 342 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 MRPL43Q8N983 215 aaKnown RBP16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 HELQQ8TDG4 1101 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 IRF2BPLQ9H1B7 796 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 PCDHA10Q9Y5I2 948 aa16.6■□□□□ 0.25
SEC61A1-207ENST00000498837 MAGEB2O15479 319 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 ZNF862O60290 1169 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 CLASP2O75122 1294 aaKnown RBP16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 IRX6P78412 446 aaPredicted RBP16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 SMC1AQ14683 1233 aaKnown RBP16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 ADCK5Q3MIX3 580 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 TPRNQ4KMQ1 711 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 CES5AQ6NT32 575 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 KANK3Q6NY19 840 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 ZNF598Q86UK7 904 aaKnown RBP16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 SMAP1Q8IYB5 467 aaPredicted RBP16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 C12orf76Q8N812 135 aaPredicted RBP16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 ADAM7Q9H2U9 754 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 CEP131Q9UPN4 1083 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 SORCS3Q9UPU3 1222 aa16.59■□□□□ 0.25
SEC61A1-207ENST00000498837 DMDP11532 3685 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 GALR2O43603 387 aaPredicted RBP16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 CSDE1O75534 798 aaKnown RBP16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 TMOD1P28289 359 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 CA8P35219 290 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 METAP2P50579 478 aaKnown RBP eCLIP16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 GPC3P51654 580 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 SETQ01105 290 aaPredicted RBP16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 ITIH3Q06033 890 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 PFKFB3Q16875 520 aaPredicted RBP16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 PRR16Q569H4 304 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 DHX32Q7L7V1 743 aaKnown RBP16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 RASEFQ8IZ41 740 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 TMEM105Q8N8V8 129 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 TCEAL9Q9UHQ7 104 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
SEC61A1-207ENST00000498837 A0A0U1RQF3 1178 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 CXCL14O95715 111 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 EOMESO95936 686 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 ASGR2P07307 311 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 DARSP14868 501 aaKnown RBP16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 BCAR1P56945 870 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 MTMR3Q13615 1198 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 RARS2Q5T160 578 aaKnown RBP16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 RNF20Q5VTR2 975 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 UBALD2Q8IYN6 164 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 FEZF2Q8TBJ5 459 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 AUTS2Q8WXX7 1259 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 FAM167AQ96KS9 214 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 NECTIN4Q96NY8 510 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 ZMYND12Q9H0C1 365 aa16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 NAP1L2Q9ULW6 460 aaPredicted RBP16.57■□□□□ 0.24
SEC61A1-207ENST00000498837 ESYT2A0FGR8 921 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 EDIL3O43854 480 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 OATP04181 439 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 MTHFRP42898 656 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 NUBP1P53384 320 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 UGCGQ16739 394 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 ASCL5Q7RTU5 278 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 REXO1Q8N1G1 1221 aaKnown RBP16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 LENG9Q96B70 501 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 SCLT1Q96NL6 688 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 C6orf50Q9HD87 102 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 DISC1Q9NRI5 854 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 NRBP2Q9NSY0 501 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms