RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 FAM217BQ9NTX9 383 aaPredicted RBP16.67■□□□□ 0.26
TRAF4-212ENST00000498540 SPG21Q9NZD8 308 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 AKT3Q9Y243 479 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 NR2E1Q9Y466 385 aa16.67■□□□□ 0.26
TRAF4-212ENST00000498540 MYO15AQ9UKN7 3530 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 C2orf71A6NGG8 1288 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 CYP3A4P08684 503 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 CDC27P30260 824 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 KRT17Q04695 432 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 MTMR3Q13615 1198 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 EFCAB12Q6NXP0 572 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 SLC39A11Q8N1S5 342 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 LRRC71Q8N4P6 559 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 GLT8D2Q9H1C3 349 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 GABBR1Q9UBS5 961 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 SORCS3Q9UPU3 1222 aa16.66■□□□□ 0.26
TRAF4-212ENST00000498540 GOLGA8AA7E2F4 631 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 GALR2O43603 387 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-212ENST00000498540 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
TRAF4-212ENST00000498540 PSAPP07602 524 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 WEE2P0C1S8 567 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 ZSCAN20P17040 1043 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-212ENST00000498540 FGFR4P22455 802 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 EIF4BP23588 611 aaKnown RBP16.65■□□□□ 0.26
TRAF4-212ENST00000498540 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
TRAF4-212ENST00000498540 SMC1AQ14683 1233 aaKnown RBP16.65■□□□□ 0.26
TRAF4-212ENST00000498540 TPRNQ4KMQ1 711 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 SMAP1Q8IYB5 467 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-212ENST00000498540 MRPL43Q8N983 215 aaKnown RBP16.65■□□□□ 0.26
TRAF4-212ENST00000498540 HELQQ8TDG4 1101 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 MAP7D2Q96T17 732 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 IRF2BPLQ9H1B7 796 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 ADAM7Q9H2U9 754 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 TBC1D22BQ9NU19 505 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 CEP131Q9UPN4 1083 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 PCDHA10Q9Y5I2 948 aa16.65■□□□□ 0.26
TRAF4-212ENST00000498540 KLF18A0A0U1RQI7 1052 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 MAGEB2O15479 319 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 METAP2P50579 478 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAF4-212ENST00000498540 SETQ01105 290 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-212ENST00000498540 ITIH3Q06033 890 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-212ENST00000498540 CES5AQ6NT32 575 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 ZNF598Q86UK7 904 aaKnown RBP16.64■□□□□ 0.25
TRAF4-212ENST00000498540 UBALD2Q8IYN6 164 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 TMEM105Q8N8V8 129 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 NECTIN4Q96NY8 510 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 DENND4AQ7Z401 1863 aa16.64■□□□□ 0.25
TRAF4-212ENST00000498540 NT5C1B-RDH14C9J2C7 533 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 ZNF862O60290 1169 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 ASGR2P07307 311 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 DARSP14868 501 aaKnown RBP16.63■□□□□ 0.25
TRAF4-212ENST00000498540 CA8P35219 290 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 GPC3P51654 580 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 NUBP1P53384 320 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 ADCK5Q3MIX3 580 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 PRR16Q569H4 304 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 RARS2Q5T160 578 aaKnown RBP16.63■□□□□ 0.25
TRAF4-212ENST00000498540 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 C12orf76Q8N812 135 aaPredicted RBP16.63■□□□□ 0.25
TRAF4-212ENST00000498540 FEZF2Q8TBJ5 459 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 LENG9Q96B70 501 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 FAM167AQ96KS9 214 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 SAMM50Q9Y512 469 aa16.63■□□□□ 0.25
TRAF4-212ENST00000498540 SPTBN4Q9H254 2564 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 A0A0U1RQF3 1178 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 ESYT2A0FGR8 921 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 PROB1E7EW31 1015 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 CSDE1O75534 798 aaKnown RBP16.62■□□□□ 0.25
TRAF4-212ENST00000498540 OATP04181 439 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 TMOD1P28289 359 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 MTHFRP42898 656 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 BCAR1P56945 870 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-212ENST00000498540 PRKCEQ02156 737 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 UGCGQ16739 394 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
TRAF4-212ENST00000498540 ASCL5Q7RTU5 278 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 TMEM173Q86WV6 379 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-212ENST00000498540 RASEFQ8IZ41 740 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 REXO1Q8N1G1 1221 aaKnown RBP16.62■□□□□ 0.25
TRAF4-212ENST00000498540 AUTS2Q8WXX7 1259 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 SCLT1Q96NL6 688 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 ZMYND12Q9H0C1 365 aa16.62■□□□□ 0.25
TRAF4-212ENST00000498540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-212ENST00000498540 WDR64B1ANS9 1081 aa16.61■□□□□ 0.25
TRAF4-212ENST00000498540 CXCL14O95715 111 aa16.61■□□□□ 0.25
TRAF4-212ENST00000498540 EOMESO95936 686 aa16.61■□□□□ 0.25
TRAF4-212ENST00000498540 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
TRAF4-212ENST00000498540 DRP2Q13474 957 aa16.61■□□□□ 0.25
TRAF4-212ENST00000498540 RNF20Q5VTR2 975 aa16.61■□□□□ 0.25
TRAF4-212ENST00000498540 VPS52Q8N1B4 723 aa16.61■□□□□ 0.25
TRAF4-212ENST00000498540 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
TRAF4-212ENST00000498540 MRPL9Q9BYD2 267 aaKnown RBP16.61■□□□□ 0.25
TRAF4-212ENST00000498540 ZBP1Q9H171 429 aa16.61■□□□□ 0.25
TRAF4-212ENST00000498540 NAP1L2Q9ULW6 460 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-212ENST00000498540 ZC3H11AO75152 810 aaKnown RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms