RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CABP7Q86V35 215 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 ECHDC2Q86YB7 292 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 MB21D2Q8IYB1 491 aaPredicted RBP13.26□□□□□ -0.29
CDK9-205ENST00000498339 CCDC105Q8IYK2 499 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 SIX5Q8N196 739 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 AUTS2Q8WXX7 1259 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 MAP7D2Q96T17 732 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 MRPL9Q9BYD2 267 aaKnown RBP13.26□□□□□ -0.29
CDK9-205ENST00000498339 RNF19AQ9NV58 838 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
CDK9-205ENST00000498339 PRC1O43663 620 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 PI15O43692 258 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 ZC3H11AO75152 810 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDK9-205ENST00000498339 C22orf31O95567 290 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 CCNE2O96020 404 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 CALM1P0DP23 149 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 CALM2P0DP24 149 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 CALM3P0DP25 149 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 CLCN3P51790 818 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 BCAR1P56945 870 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 DSC3Q14574 896 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 CLLU1OSQ5K130 101 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 SWSAP1Q6NVH7 229 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 ABHD15Q6UXT9 468 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 KIAA2013Q8IYS2 634 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 VPS52Q8N1B4 723 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 DTWD2Q8NBA8 298 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 ZNF668Q96K58 619 aaPredicted RBP13.25□□□□□ -0.29
CDK9-205ENST00000498339 RTP3Q9BQQ7 232 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 ANO3Q9BYT9 981 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 SFXN1Q9H9B4 322 aa13.25□□□□□ -0.29
CDK9-205ENST00000498339 IGKV6D-21A0A0A0MT36 114 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 MED19A0JLT2 244 aaPredicted RBP13.24□□□□□ -0.29
CDK9-205ENST00000498339 GPR32O75388 356 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 ATG7O95352 703 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 LMNAP02545 664 aaKnown RBP13.24□□□□□ -0.29
CDK9-205ENST00000498339 TMOD1P28289 359 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 NLRP11P59045 1033 aaKnown RBP13.24□□□□□ -0.29
CDK9-205ENST00000498339 TDGQ13569 410 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 OTOP3Q7RTS5 596 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 MICU3Q86XE3 530 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 RMDN1Q96DB5 314 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 ZBP1Q9H171 429 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 DUSP12Q9UNI6 340 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 CEP131Q9UPN4 1083 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 SLC12A7Q9Y666 1083 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 FRYLO94915 3013 aa13.24□□□□□ -0.29
CDK9-205ENST00000498339 CACNA1AO00555 2505 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 ZBTB42B2RXF5 422 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 SH2B2O14492 632 aaPredicted RBP13.23□□□□□ -0.29
CDK9-205ENST00000498339 FOSP01100 380 aaPredicted RBP13.23□□□□□ -0.29
CDK9-205ENST00000498339 ADCY7P51828 1080 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 GIT2Q14161 759 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 WWC2Q6AWC2 1192 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 LRRC71Q8N4P6 559 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
CDK9-205ENST00000498339 RIN2Q8WYP3 895 aaPredicted RBP13.23□□□□□ -0.29
CDK9-205ENST00000498339 R4GN57 208 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 MIA3Q5JRA6 1907 aa13.23□□□□□ -0.29
CDK9-205ENST00000498339 GVINP1Q7Z2Y8 2422 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 CFHP08603 1231 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 NPR3P17342 541 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 ATP4AP20648 1035 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 FGFR4P22455 802 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 EIF4BP23588 611 aaKnown RBP13.22□□□□□ -0.29
CDK9-205ENST00000498339 MCM5P33992 734 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 RNASELQ05823 741 aaKnown RBP13.22□□□□□ -0.29
CDK9-205ENST00000498339 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 EFCAB12Q6NXP0 572 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 PPFIBP1Q86W92 1011 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 TMTC2Q8N394 836 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 TMEM87BQ96K49 555 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 GBP3Q9H0R5 595 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 RIC8AQ9NPQ8 531 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 DACT1Q9NYF0 836 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 INPP5FQ9Y2H2 1132 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 SAMM50Q9Y512 469 aa13.22□□□□□ -0.29
CDK9-205ENST00000498339 WDR87Q6ZQQ6 2873 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 IPO5O00410 1097 aaKnown RBP13.21□□□□□ -0.29
CDK9-205ENST00000498339 MEIS1O00470 390 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 MAGEB2O15479 319 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 NARSO43776 548 aaKnown RBP13.21□□□□□ -0.29
CDK9-205ENST00000498339 IGHDP01880 384 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 SSBP05455 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDK9-205ENST00000498339 PSAPP07602 524 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 CTSAP10619 480 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
CDK9-205ENST00000498339 KLRC2P26717 231 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 POLGP54098 1239 aaPredicted RBP13.21□□□□□ -0.29
CDK9-205ENST00000498339 AP3B2Q13367 1082 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 SPECC1Q5M775 1068 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 TTC22Q5TAA0 569 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 TMEM173Q86WV6 379 aaPredicted RBP13.21□□□□□ -0.29
CDK9-205ENST00000498339 FEZF2Q8TBJ5 459 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms