RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 HPXP02790 462 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 PDCP20941 246 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 GJA8P48165 433 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 FKBP1AP62942 108 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 PPARAQ07869 468 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 PRKG1Q13976 671 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 SBK1Q52WX2 424 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 SYNE3Q6ZMZ3 975 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 ADGRA1Q86SQ6 560 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 TDHQ8IZJ6 230 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 GRIN3AQ8TCU5 1115 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 ZNF384Q8TF68 577 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 SDR42E1Q8WUS8 393 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 STAG1Q8WVM7 1258 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 TNPO1Q92973 898 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 ELMO3Q96BJ8 720 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 TCEANC2Q96MN5 208 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 KCNC2Q96PR1 638 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 PTPN18Q99952 460 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 LLPHQ9BRT6 129 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 DBNDD1Q9H9R9 158 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 EPB41L4AQ9HCS5 686 aaPredicted RBP6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 TOMM22Q9NS69 142 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 ARPP21Q9UBL0 812 aaPredicted RBP6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 NAP1L2Q9ULW6 460 aaPredicted RBP6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 MROH7-TTC4A0A0A0MT08 1334 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 PRUNE2Q8WUY3 3088 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 LAMA4Q16363 1823 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 POLR2AP24928 1970 aaKnown RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 GPR75-ASB3A0A0A6YYF3 556 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 MANSC4A6NHS7 340 aaPredicted RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 B4E1Z4 1266 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 RPS12P25398 132 aaKnown RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 GJB2P29033 226 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 MCM4P33991 863 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 LIFRP42702 1097 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 EVCP57679 992 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 INHBEP58166 350 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 DLG4P78352 724 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 HMGN5P82970 282 aaKnown RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 PDE4BQ07343 736 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 PDE4CQ08493 712 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 APOBRQ0VD83 1088 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 STK3Q13188 491 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 RRP12Q5JTH9 1297 aaKnown RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 LDLRAD1Q5T700 205 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 STRIP1Q5VSL9 837 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 FAM109BQ6ICB4 259 aaPredicted RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 CPLX2Q6PUV4 134 aaKnown RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 HHIPL2Q6UWX4 724 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 TBC1D10CQ8IV04 446 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 NECAB1Q8N987 351 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 FAM184AQ8NB25 1140 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 ESR2Q92731 530 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 GTF3C6Q969F1 213 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 CDX2Q99626 313 aaPredicted RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 MRIQ9BWK5 157 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 LRRC2Q9BYS8 371 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 BCO2Q9BYV7 579 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 ZNF287Q9HBT7 754 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 ZMYND8Q9ULU4 1186 aaPredicted RBP6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 PCDHA4Q9UN74 947 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 SAMM50Q9Y512 469 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 ATP6V1DQ9Y5K8 247 aa6.15□□□□□ -1.42
HMGXB4-208ENST00000498325 KLF18A0A0U1RQI7 1052 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 CCDC69A6NI79 296 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 IFIT3O14879 490 aaKnown RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 STX6O43752 255 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 ECE2O60344 883 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 LARGE1O95461 756 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 BRD1O95696 1058 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 GJB1P08034 283 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 SYT1P21579 422 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 PDIA3P30101 505 aaKnown RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 TRHRP34981 398 aaPredicted RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 BTDP43251 543 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 MAGEA10P43363 369 aaPredicted RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 ANTXR2P58335 489 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 HDLBPQ00341 1268 aaKnown RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 WTAPQ15007 396 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 SKOR2Q2VWA4 1001 aaPredicted RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 CCDC178Q5BJE1 867 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 TCERG1LQ5VWI1 586 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 LARP1BQ659C4 914 aaKnown RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 ZNF746Q6NUN9 644 aaPredicted RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 CTR9Q6PD62 1173 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 CLEC17AQ6ZS10 378 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 CHST3Q7LGC8 479 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 IQCA1Q86XH1 822 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 TEX11Q8IYF3 940 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 SH3RF3Q8TEJ3 882 aaPredicted RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 TGFBRAP1Q8WUH2 860 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 TEKT1Q969V4 418 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 UBAC1Q9BSL1 405 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 RNF32Q9H0A6 362 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 MCM9Q9NXL9 1143 aa6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 CNOT6Q9ULM6 557 aaKnown RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 TTF2Q9UNY4 1162 aaKnown RBP6.14□□□□□ -1.43
HMGXB4-208ENST00000498325 GAKO14976 1311 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms