RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 METTL13Q8N6R0 699 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 IGSF22Q8N9C0 903 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 LRCH3Q96II8 777 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 ZFRQ96KR1 1074 aaKnown RBP12.58□□□□□ -0.4
ERCC8-208ENST00000497892 OSBPL7Q9BZF2 842 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 CYP26B1Q9NR63 512 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 PPME1Q9Y570 386 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 TRPV2Q9Y5S1 764 aa12.58□□□□□ -0.4
ERCC8-208ENST00000497892 IGKV6-21A0A0C4DH24 114 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 ZBBXA8MT70 800 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 M0QZ92 97 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 STX6O43752 255 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 EFCAB14O75071 495 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 MAFO75444 373 aaPredicted RBP12.57□□□□□ -0.4
ERCC8-208ENST00000497892 SPATA31C1P0DKV0 1188 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 GHRP10912 638 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 CLCN3P51790 818 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 LPIN1Q14693 890 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 FBXO47Q5MNV8 452 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
ERCC8-208ENST00000497892 EFCAB12Q6NXP0 572 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 TSHZ1Q6ZSZ6 1077 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 TPH2Q8IWU9 490 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 LRRC71Q8N4P6 559 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 USP38Q8NB14 1042 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 DBF4BQ8NFT6 615 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 ERMNQ8TAM6 284 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 SEPT8Q92599 483 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 SH2D3AQ9BRG2 576 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 IFIH1Q9BYX4 1025 aaKnown RBP12.57□□□□□ -0.4
ERCC8-208ENST00000497892 CELF4Q9BZC1 486 aaKnown RBP12.57□□□□□ -0.4
ERCC8-208ENST00000497892 RAB34Q9BZG1 259 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 TUFT1Q9NNX1 390 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 SLC4A7Q9Y6M7 1214 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 SQORQ9Y6N5 450 aa12.57□□□□□ -0.4
ERCC8-208ENST00000497892 CDH23Q9H251 3354 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.56□□□□□ -0.4
ERCC8-208ENST00000497892 ABHD14A-ACY1A0A1B0GW23 586 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.56□□□□□ -0.4
ERCC8-208ENST00000497892 RBAK-RBAKDNI3L0D1 243 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 MED24O75448 989 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 RPA1P27694 616 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 TMOD1P28289 359 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 RFC5P40937 340 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 NPEPPSP55786 919 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 WDR5P61964 334 aaKnown RBP12.56□□□□□ -0.4
ERCC8-208ENST00000497892 IKBKEQ14164 716 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 PDIA5Q14554 519 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 IL17AQ16552 155 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 DTHD1Q6ZMT9 781 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 OTUD6AQ7L8S5 288 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 CATSPER3Q86XQ3 398 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 APBB2Q92870 758 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 CEP170P1Q96L14 293 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 SLC9A7Q96T83 725 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 POLR3CQ9BUI4 534 aaPredicted RBP12.56□□□□□ -0.4
ERCC8-208ENST00000497892 LRWD1Q9UFC0 647 aa12.56□□□□□ -0.4
ERCC8-208ENST00000497892 ZBTB39O15060 712 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 BMP15O95972 392 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 VTNP04004 478 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 PDIA4P13667 645 aaKnown RBP12.55□□□□□ -0.4
ERCC8-208ENST00000497892 ATP2A2P16615 1042 aaKnown RBP12.55□□□□□ -0.4
ERCC8-208ENST00000497892 KCNJ6P48051 423 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 POLGP54098 1239 aaPredicted RBP12.55□□□□□ -0.4
ERCC8-208ENST00000497892 DRP2Q13474 957 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 KIZQ2M2Z5 673 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 XKR9Q5GH70 373 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 ARL6IP4Q66PJ3 421 aaKnown RBP12.55□□□□□ -0.4
ERCC8-208ENST00000497892 TMEM40Q8WWA1 233 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 JPH2Q9BR39 696 aaPredicted RBP12.55□□□□□ -0.4
ERCC8-208ENST00000497892 DHX33Q9H6R0 707 aaKnown RBP12.55□□□□□ -0.4
ERCC8-208ENST00000497892 AGO3Q9H9G7 860 aaKnown RBP12.55□□□□□ -0.4
ERCC8-208ENST00000497892 SUGCTQ9HAC7 445 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 ANKEF1Q9NU02 776 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 AKT3Q9Y243 479 aa12.55□□□□□ -0.4
ERCC8-208ENST00000497892 GRXCR1A8MXD5 290 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 GAS2O43903 313 aaKnown RBP12.54□□□□□ -0.4
ERCC8-208ENST00000497892 GPR32O75388 356 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
ERCC8-208ENST00000497892 MUTP22033 750 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 CD52P31358 61 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 RARRES1P49788 294 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 DNM2P50570 870 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 GPC3P51654 580 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 CRYBB1P53674 252 aaPredicted RBP12.54□□□□□ -0.4
ERCC8-208ENST00000497892 DEFB103AP81534 67 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 PAK2Q13177 524 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 EMC2Q15006 297 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 HERC6Q8IVU3 1022 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 EXOC8Q8IYI6 725 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 PIGOQ8TEQ8 1089 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 OSMRQ99650 979 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 PBX4Q9BYU1 374 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
ERCC8-208ENST00000497892 ZSCAN16Q9H4T2 348 aaPredicted RBP12.54□□□□□ -0.4
ERCC8-208ENST00000497892 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms