RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 ACSF2Q96CM8 615 aaPredicted RBP18.77■□□□□ 0.6
VIM-208ENST00000497849 DLL3Q9NYJ7 618 aa18.77■□□□□ 0.6
VIM-208ENST00000497849 FBXL21Q9UKT6 434 aa18.77■□□□□ 0.6
VIM-208ENST00000497849 IRAK3Q9Y616 596 aa18.77■□□□□ 0.6
VIM-208ENST00000497849 ACACBO00763 2458 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 MYH9P35579 1960 aaKnown RBP18.76■□□□□ 0.59
VIM-208ENST00000497849 hCG_1642624A0A1W2PR95 340 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 E7EWF7 191 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 BACH1O14867 736 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 NARSO43776 548 aaKnown RBP18.76■□□□□ 0.59
VIM-208ENST00000497849 DDAH1O94760 285 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 KIF5BP33176 963 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 BCAR1P56945 870 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 OTOP3Q7RTS5 596 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 RALYLQ86SE5 291 aaKnown RBP18.76■□□□□ 0.59
VIM-208ENST00000497849 GPR149Q86SP6 731 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 ZNF598Q86UK7 904 aaKnown RBP18.76■□□□□ 0.59
VIM-208ENST00000497849 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 RNF169Q8NCN4 708 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 HELQQ8TDG4 1101 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 CNTNAP3BQ96NU0 1288 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 LZTS2Q9BRK4 669 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 CNTNAP3Q9BZ76 1288 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 LY9Q9HBG7 655 aa18.76■□□□□ 0.59
VIM-208ENST00000497849 U3KPZ7 1027 aaPredicted RBP18.76■□□□□ 0.59
VIM-208ENST00000497849 SPTBN2O15020 2390 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 KRBA1A5PL33 1030 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 DDX39AO00148 427 aaKnown RBP18.75■□□□□ 0.59
VIM-208ENST00000497849 PTH1RQ03431 593 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 CEP55Q53EZ4 464 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 FAM160B1Q5W0V3 765 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 CCDC149Q6ZUS6 474 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 CHD1LQ86WJ1 897 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 MB21D2Q8IYB1 491 aaPredicted RBP18.75■□□□□ 0.59
VIM-208ENST00000497849 TMEM169Q96HH4 297 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 PGBD1Q96JS3 809 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 ZNF302Q9NR11 478 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 ZFHX4Q86UP3 3567 aa18.75■□□□□ 0.59
VIM-208ENST00000497849 GPR179Q6PRD1 2367 aa18.74■□□□□ 0.59
VIM-208ENST00000497849 MEIS1O00470 390 aa18.74■□□□□ 0.59
VIM-208ENST00000497849 CTSAP10619 480 aa18.74■□□□□ 0.59
VIM-208ENST00000497849 ZSCAN20P17040 1043 aaPredicted RBP18.74■□□□□ 0.59
VIM-208ENST00000497849 ALDH7A1P49419 539 aaKnown RBP18.74■□□□□ 0.59
VIM-208ENST00000497849 BMS1Q14692 1282 aaKnown RBP18.74■□□□□ 0.59
VIM-208ENST00000497849 PDXDC2PQ6P474 469 aa18.74■□□□□ 0.59
VIM-208ENST00000497849 CABP7Q86V35 215 aa18.74■□□□□ 0.59
VIM-208ENST00000497849 DCLK2Q8N568 766 aa18.74■□□□□ 0.59
VIM-208ENST00000497849 METTL13Q8N6R0 699 aa18.74■□□□□ 0.59
VIM-208ENST00000497849 RIN2Q8WYP3 895 aaPredicted RBP18.74■□□□□ 0.59
VIM-208ENST00000497849 ADAMTS10Q9H324 1103 aa18.74■□□□□ 0.59
VIM-208ENST00000497849 A0A0U1RQF3 1178 aa18.73■□□□□ 0.59
VIM-208ENST00000497849 GNAQP50148 359 aa18.73■□□□□ 0.59
VIM-208ENST00000497849 NLRP11P59045 1033 aaKnown RBP18.73■□□□□ 0.59
VIM-208ENST00000497849 GIT2Q14161 759 aa18.73■□□□□ 0.59
VIM-208ENST00000497849 SWSAP1Q6NVH7 229 aa18.73■□□□□ 0.59
VIM-208ENST00000497849 BCL7CQ8WUZ0 217 aaPredicted RBP18.73■□□□□ 0.59
VIM-208ENST00000497849 SFXN1Q9H9B4 322 aa18.73■□□□□ 0.59
VIM-208ENST00000497849 IGSF9Q9P2J2 1179 aa18.73■□□□□ 0.59
VIM-208ENST00000497849 WNT16Q9UBV4 365 aa18.73■□□□□ 0.59
VIM-208ENST00000497849 CACNA1IQ9P0X4 2223 aa18.73■□□□□ 0.59
VIM-208ENST00000497849 WDR81Q562E7 1941 aa18.72■□□□□ 0.59
VIM-208ENST00000497849 DHX15O43143 795 aaKnown RBP18.72■□□□□ 0.59
VIM-208ENST00000497849 N4BP1O75113 896 aaKnown RBP18.72■□□□□ 0.59
VIM-208ENST00000497849 CFHP08603 1231 aa18.72■□□□□ 0.59
VIM-208ENST00000497849 RXRAP19793 462 aa18.72■□□□□ 0.59
VIM-208ENST00000497849 EIF4BP23588 611 aaKnown RBP18.72■□□□□ 0.59
VIM-208ENST00000497849 CLCN3P51790 818 aa18.72■□□□□ 0.59
VIM-208ENST00000497849 POLGP54098 1239 aaPredicted RBP18.72■□□□□ 0.59
VIM-208ENST00000497849 DDX53Q86TM3 631 aaKnown RBP18.72■□□□□ 0.59
VIM-208ENST00000497849 LINC01465Q8N7H1 131 aa18.72■□□□□ 0.59
VIM-208ENST00000497849 TMEM87AQ8NBN3 555 aa18.72■□□□□ 0.59
VIM-208ENST00000497849 RSAD2Q8WXG1 361 aa18.72■□□□□ 0.59
VIM-208ENST00000497849 BBXQ8WY36 941 aaPredicted RBP18.72■□□□□ 0.59
VIM-208ENST00000497849 IGSF21Q96ID5 467 aa18.72■□□□□ 0.59
VIM-208ENST00000497849 MRPL9Q9BYD2 267 aaKnown RBP18.72■□□□□ 0.59
VIM-208ENST00000497849 DOCK8Q8NF50 2099 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 STK25O00506 426 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 NUCB1Q02818 461 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 LETM2Q2VYF4 491 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 TYW1BQ6NUM6 668 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 TRMT1LQ7Z2T5 733 aaKnown RBP18.71■□□□□ 0.59
VIM-208ENST00000497849 RUBCNQ92622 972 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 ZNF668Q96K58 619 aaPredicted RBP18.71■□□□□ 0.59
VIM-208ENST00000497849 HINFPQ9BQA5 517 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 VN1R3Q9BXE9 311 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 DLGAP2Q9P1A6 1054 aa18.71■□□□□ 0.59
VIM-208ENST00000497849 MAFBQ9Y5Q3 323 aaPredicted RBP18.71■□□□□ 0.59
VIM-208ENST00000497849 ZC3H11AO75152 810 aaKnown RBP eCLIP18.7■□□□□ 0.58
VIM-208ENST00000497849 SP9P0CG40 484 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 FGFR4P22455 802 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 PTPN14Q15678 1187 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 MIS18BP1Q6P0N0 1132 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 HEATR3Q7Z4Q2 680 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 PPFIBP1Q86W92 1011 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 CKAP2LQ8IYA6 745 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 CCDC82Q8N4S0 544 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 ANO3Q9BYT9 981 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 AKT3Q9Y243 479 aa18.7■□□□□ 0.58
VIM-208ENST00000497849 GALTP07902 379 aa18.69■□□□□ 0.58
VIM-208ENST00000497849 CLCN4P51793 760 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms