RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 HOXB8P17481 243 aaPredicted RBP24.63■■□□□ 1.53
CLIC4-204ENST00000497755 EIF4BP23588 611 aaKnown RBP24.63■■□□□ 1.53
CLIC4-204ENST00000497755 AVPR2P30518 371 aa24.63■■□□□ 1.53
CLIC4-204ENST00000497755 RCAN1P53805 252 aa24.63■■□□□ 1.53
CLIC4-204ENST00000497755 SETQ01105 290 aaPredicted RBP24.63■■□□□ 1.53
CLIC4-204ENST00000497755 KRT17Q04695 432 aa24.63■■□□□ 1.53
CLIC4-204ENST00000497755 PRR16Q569H4 304 aa24.63■■□□□ 1.53
CLIC4-204ENST00000497755 TMC7Q7Z402 723 aa24.63■■□□□ 1.53
CLIC4-204ENST00000497755 LRRC71Q8N4P6 559 aa24.63■■□□□ 1.53
CLIC4-204ENST00000497755 SPG21Q9NZD8 308 aa24.63■■□□□ 1.53
CLIC4-204ENST00000497755 PPM1AP35813 382 aa24.62■■□□□ 1.53
CLIC4-204ENST00000497755 CLLU1OSQ5K130 101 aa24.62■■□□□ 1.53
CLIC4-204ENST00000497755 MCTP2Q6DN12 878 aa24.62■■□□□ 1.53
CLIC4-204ENST00000497755 ABI1Q8IZP0 508 aa24.62■■□□□ 1.53
CLIC4-204ENST00000497755 LRRC43Q8N309 656 aa24.62■■□□□ 1.53
CLIC4-204ENST00000497755 MRPL43Q8N983 215 aaKnown RBP24.62■■□□□ 1.53
CLIC4-204ENST00000497755 ZNF668Q96K58 619 aaPredicted RBP24.62■■□□□ 1.53
CLIC4-204ENST00000497755 C6orf50Q9HD87 102 aa24.62■■□□□ 1.53
CLIC4-204ENST00000497755 CDH22Q9UJ99 828 aa24.62■■□□□ 1.53
CLIC4-204ENST00000497755 ZNF862O60290 1169 aa24.61■■□□□ 1.53
CLIC4-204ENST00000497755 SP100P23497 879 aaPredicted RBP24.61■■□□□ 1.53
CLIC4-204ENST00000497755 TMOD1P28289 359 aa24.61■■□□□ 1.53
CLIC4-204ENST00000497755 CIITAP33076 1130 aa24.61■■□□□ 1.53
CLIC4-204ENST00000497755 REXO1Q8N1G1 1221 aaKnown RBP24.61■■□□□ 1.53
CLIC4-204ENST00000497755 ZNF710Q8N1W2 664 aa24.61■■□□□ 1.53
CLIC4-204ENST00000497755 LENG9Q96B70 501 aa24.61■■□□□ 1.53
CLIC4-204ENST00000497755 FAM167AQ96KS9 214 aa24.61■■□□□ 1.53
CLIC4-204ENST00000497755 MAP7D2Q96T17 732 aa24.61■■□□□ 1.53
CLIC4-204ENST00000497755 SAMM50Q9Y512 469 aa24.61■■□□□ 1.53
CLIC4-204ENST00000497755 PTPRZ1P23471 2315 aaPredicted RBP24.6■■□□□ 1.53
CLIC4-204ENST00000497755 A0A0U1RQF3 1178 aa24.6■■□□□ 1.53
CLIC4-204ENST00000497755 EDIL3O43854 480 aa24.6■■□□□ 1.53
CLIC4-204ENST00000497755 ZNF598Q86UK7 904 aaKnown RBP24.6■■□□□ 1.53
CLIC4-204ENST00000497755 SLC39A11Q8N1S5 342 aa24.6■■□□□ 1.53
CLIC4-204ENST00000497755 RNF169Q8NCN4 708 aa24.6■■□□□ 1.53
CLIC4-204ENST00000497755 NRBP2Q9NSY0 501 aa24.6■■□□□ 1.53
CLIC4-204ENST00000497755 TCEAL9Q9UHQ7 104 aa24.6■■□□□ 1.53
CLIC4-204ENST00000497755 NAP1L2Q9ULW6 460 aaPredicted RBP24.6■■□□□ 1.53
CLIC4-204ENST00000497755 HCFC2Q9Y5Z7 792 aa24.6■■□□□ 1.53
CLIC4-204ENST00000497755 MYO15AQ9UKN7 3530 aa24.6■■□□□ 1.53
CLIC4-204ENST00000497755 C2orf71A6NGG8 1288 aa24.59■■□□□ 1.53
CLIC4-204ENST00000497755 EOMESO95936 686 aa24.59■■□□□ 1.53
CLIC4-204ENST00000497755 PDGFBP01127 241 aaPredicted RBP24.59■■□□□ 1.53
CLIC4-204ENST00000497755 DARSP14868 501 aaKnown RBP24.59■■□□□ 1.53
CLIC4-204ENST00000497755 METAP2P50579 478 aaKnown RBP eCLIP24.59■■□□□ 1.53
CLIC4-204ENST00000497755 GPC3P51654 580 aa24.59■■□□□ 1.53
CLIC4-204ENST00000497755 CASP10Q92851 521 aa24.59■■□□□ 1.53
CLIC4-204ENST00000497755 RIPOR3Q96MK2 946 aa24.59■■□□□ 1.53
CLIC4-204ENST00000497755 ADAM7Q9H2U9 754 aa24.59■■□□□ 1.53
CLIC4-204ENST00000497755 FAM86C1Q9NVL1 165 aa24.59■■□□□ 1.53
CLIC4-204ENST00000497755 CCDC196A0A1B0GTZ2 297 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 WDR64B1ANS9 1081 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 PRPF3O43395 683 aaKnown RBP24.58■■□□□ 1.53
CLIC4-204ENST00000497755 OATP04181 439 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 FGFR4P22455 802 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 GNA11P29992 359 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 KRT32Q14532 448 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 SMC1AQ14683 1233 aaKnown RBP24.58■■□□□ 1.53
CLIC4-204ENST00000497755 TPRNQ4KMQ1 711 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 BMP2KLQ5H9B9 411 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 ZBTB33Q86T24 672 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 HELQQ8TDG4 1101 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 CCDC12Q8WUD4 166 aaPredicted RBP24.58■■□□□ 1.53
CLIC4-204ENST00000497755 DISC1Q9NRI5 854 aa24.58■■□□□ 1.53
CLIC4-204ENST00000497755 MSH4O15457 936 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 ST18O60284 1047 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 CLASP2O75122 1294 aaKnown RBP24.57■■□□□ 1.52
CLIC4-204ENST00000497755 HMGB1P09429 215 aaKnown RBP24.57■■□□□ 1.52
CLIC4-204ENST00000497755 CPA1P15085 419 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 UGCGQ16739 394 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 SKAP1Q86WV1 359 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 KREMEN2Q8NCW0 462 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 POMKQ9H5K3 350 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 TSHZ2Q9NRE2 1034 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 NR2E1Q9Y466 385 aa24.57■■□□□ 1.52
CLIC4-204ENST00000497755 NT5C1B-RDH14C9J2C7 533 aa24.56■■□□□ 1.52
CLIC4-204ENST00000497755 CSDE1O75534 798 aaKnown RBP24.56■■□□□ 1.52
CLIC4-204ENST00000497755 BCAR1P56945 870 aa24.56■■□□□ 1.52
CLIC4-204ENST00000497755 PRKCEQ02156 737 aa24.56■■□□□ 1.52
CLIC4-204ENST00000497755 ITIH3Q06033 890 aa24.56■■□□□ 1.52
CLIC4-204ENST00000497755 CES5AQ6NT32 575 aa24.56■■□□□ 1.52
CLIC4-204ENST00000497755 C2CD4DB7Z1M9 353 aa24.55■■□□□ 1.52
CLIC4-204ENST00000497755 CXCL14O95715 111 aa24.55■■□□□ 1.52
CLIC4-204ENST00000497755 ALDH7A1P49419 539 aaKnown RBP24.55■■□□□ 1.52
CLIC4-204ENST00000497755 FGD1P98174 961 aa24.55■■□□□ 1.52
CLIC4-204ENST00000497755 TARBP2Q15633 366 aaKnown RBP24.55■■□□□ 1.52
CLIC4-204ENST00000497755 Q6ZUG5 572 aa24.55■■□□□ 1.52
CLIC4-204ENST00000497755 NECTIN4Q96NY8 510 aa24.55■■□□□ 1.52
CLIC4-204ENST00000497755 RIT2Q99578 217 aa24.55■■□□□ 1.52
CLIC4-204ENST00000497755 RIF1Q5UIP0 2472 aaKnown RBP24.55■■□□□ 1.52
CLIC4-204ENST00000497755 DRP2Q13474 957 aa24.54■■□□□ 1.52
CLIC4-204ENST00000497755 NLRP7Q8WX94 980 aa24.54■■□□□ 1.52
CLIC4-204ENST00000497755 ATOH1Q92858 354 aaPredicted RBP24.54■■□□□ 1.52
CLIC4-204ENST00000497755 BRF1Q92994 677 aa24.54■■□□□ 1.52
CLIC4-204ENST00000497755 PHKBQ93100 1093 aa24.54■■□□□ 1.52
CLIC4-204ENST00000497755 CCDC136Q96JN2 1154 aa24.54■■□□□ 1.52
CLIC4-204ENST00000497755 SCLT1Q96NL6 688 aa24.54■■□□□ 1.52
CLIC4-204ENST00000497755 IRF2BPLQ9H1B7 796 aa24.54■■□□□ 1.52
CLIC4-204ENST00000497755 DACT1Q9NYF0 836 aa24.54■■□□□ 1.52
CLIC4-204ENST00000497755 H0Y858 1186 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms