RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CTSWP56202 376 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 SRRM1Q8IYB3 904 aaKnown RBP14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 LRRC57Q8N9N7 239 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 ZBTB38Q8NAP3 1195 aaPredicted RBP14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 LRRC8CQ8TDW0 803 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 MRRFQ96E11 262 aaKnown RBP14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 CHORDC1Q9UHD1 332 aaPredicted RBP14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 ZBTB1Q9Y2K1 713 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 FLT1P17948 1338 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 LTN1O94822 1766 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 NPTXRO95502 500 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 ETS2P15036 469 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 KCNJ1P48048 391 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 VPS41P49754 854 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 UNC13DQ70J99 1090 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 SMIM5Q71RC9 77 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 VPS36Q86VN1 386 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 COL23A1Q86Y22 540 aaPredicted RBP14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 CCDC105Q8IYK2 499 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 ISCA1Q9BUE6 129 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 ADAM33Q9BZ11 813 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 GFPT2O94808 682 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 RPL21P46778 160 aaKnown RBP14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 LRRC63Q05C16 580 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 MGAT5Q09328 741 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 GUF1Q8N442 669 aaKnown RBP14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 SNX29Q8TEQ0 813 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 GJA10Q969M2 543 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 OCEL1Q9H607 264 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 NKIRAS1Q9NYS0 192 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 ATRNO75882 1429 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 LMO7Q8WWI1 1683 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 RPTORQ8N122 1335 aa14.09□□□□□ -0.15
GAPVD1-220ENST00000497580 CREB3O43889 395 aa14.08□□□□□ -0.15
GAPVD1-220ENST00000497580 ATP9AO75110 1047 aa14.08□□□□□ -0.15
GAPVD1-220ENST00000497580 KRT18P05783 430 aaKnown RBP14.08□□□□□ -0.15
GAPVD1-220ENST00000497580 NUDT17P0C025 328 aa14.08□□□□□ -0.15
GAPVD1-220ENST00000497580 FGFBP2Q9BYJ0 223 aa14.08□□□□□ -0.15
GAPVD1-220ENST00000497580 RHBDL2Q9NX52 303 aa14.08□□□□□ -0.15
GAPVD1-220ENST00000497580 CACNA2D1P54289 1103 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 KLRC3Q07444 240 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 KCNH2Q12809 1159 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 DIXDC1Q155Q3 683 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 NT5DC3Q86UY8 548 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 TBC1D16Q8TBP0 767 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 SH3RF3Q8TEJ3 882 aaPredicted RBP14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 NMRK1Q9NWW6 199 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 SUGT1Q9Y2Z0 365 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 A0A1W2PRG0 241 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 SMAPO00193 183 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 GNAZP19086 355 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 DUPD1Q68J44 220 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 ASRGL1Q7L266 308 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 KIAA1683Q9H0B3 1180 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 ZDHHC18Q9NUE0 388 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 STX8Q9UNK0 236 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 LRRC42Q9Y546 428 aa14.08□□□□□ -0.16
GAPVD1-220ENST00000497580 KCNQ4P56696 695 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 DNAJC3Q13217 504 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 DYDC2Q96IM9 177 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 TBC1D10AQ9BXI6 508 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 NPHP3-ACAD11A0A0J9YXS1 232 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 RIPK2O43353 540 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 CSF1RP07333 972 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 GALCP54803 685 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 TRIP13Q15645 432 aaPredicted RBP14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 EXOC3L4Q17RC7 722 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 ZC2HC1CQ53FD0 456 aaPredicted RBP14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 ZDHHC24Q6UX98 284 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 SYCE1Q8N0S2 351 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 LRRC37BQ96QE4 947 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 EDEM3Q9BZQ6 932 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 NT5C3AQ9H0P0 336 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 SPEF2Q9C093 1822 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 MYH2Q9UKX2 1941 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 RCN1Q15293 331 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 FAM26FQ5R3K3 315 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 NLRP10Q86W26 655 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 GLYCTKQ8IVS8 523 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 NUDT12Q9BQG2 462 aa14.07□□□□□ -0.16
GAPVD1-220ENST00000497580 KIAA0391O15091 583 aaKnown RBP14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 SPAG7O75391 227 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 AFPP02771 609 aaKnown RBP14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 PTENP60484 403 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 HERC4Q5GLZ8 1057 aaPredicted RBP14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 KCNK18Q7Z418 384 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 VGLL2Q8N8G2 317 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 MMTAG2Q9BU76 263 aaKnown RBP14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 PFASO15067 1338 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 MAPK7Q13164 816 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 GRB10Q13322 594 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 DENND2DQ9H6A0 471 aaPredicted RBP14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 BLOC1S4Q9NUP1 217 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 SUCLA2Q9P2R7 463 aaPredicted RBP14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 ANKRD63C9JTQ0 380 aa14.06□□□□□ -0.16
GAPVD1-220ENST00000497580 OAS1P00973 400 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms