RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 FAM71BQ8TC56 605 aa12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 SYN2Q92777 582 aaPredicted RBP12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 SH3GL3Q99963 347 aa12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 TUBB2BQ9BVA1 445 aa12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 STRA6Q9BX79 667 aa12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 PXMP2Q9NR77 195 aa12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 ZNF232Q9UNY5 417 aa12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 EPN1Q9Y6I3 576 aaPredicted RBP12.65□□□□□ -0.39
SNRNP200-208ENST00000497539 ALAS1P13196 640 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 GRIK3Q13003 919 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 GPRASP2Q96D09 838 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 PDCD2LQ9BRP1 358 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 PCDHGA4Q9Y5G9 962 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 ARID2Q68CP9 1835 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 LRRC37A2A6NM11 1700 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 ZMYM2Q9UBW7 1377 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 ZNF185O15231 689 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 STAM2O75886 525 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 NDUFA10O95299 355 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 LCA5LO95447 670 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 CASP5P51878 434 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 RPS6P62753 249 aaKnown RBP12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 CYP4A11Q02928 519 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 ITGB3BPQ13352 177 aaPredicted RBP12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 CTTNQ14247 550 aaKnown RBP12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 SLC30A10Q6XR72 485 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 RNF207Q6ZRF8 634 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 A1CFQ9NQ94 594 aaKnown RBP12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 PLAGL2Q9UPG8 496 aa12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 SCAF8Q9UPN6 1271 aaKnown RBP12.64□□□□□ -0.39
SNRNP200-208ENST00000497539 ASTN1O14525 1302 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 TRAF5O00463 557 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 CETN3O15182 167 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 NKRFO15226 690 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 MYBL2P10244 700 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 TRIM21P19474 475 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 SFNP31947 248 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 JAK3P52333 1124 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 MCCD1P59942 119 aaPredicted RBP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 ALCAMQ13740 583 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 COG2Q14746 738 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 TSR1Q2NL82 804 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 ZKSCAN4Q969J2 545 aaPredicted RBP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 TAAR1Q96RJ0 339 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 LXNQ9BS40 222 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 WRAP73Q9P2S5 460 aaPredicted RBP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 PPP1R37O75864 691 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 UBXN2AP68543 259 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 DGKZQ13574 1117 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 TPH2Q8IWU9 490 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 BAP1Q92560 729 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 UIMC1Q96RL1 719 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 GBP3Q9H0R5 595 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 PARVGQ9HBI0 331 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 METTL14Q9HCE5 456 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 ADARB2Q9NS39 739 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 RNF146Q9NTX7 359 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 ZNHIT6Q9NWK9 470 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 DUSP10Q9Y6W6 482 aa12.63□□□□□ -0.39
SNRNP200-208ENST00000497539 WDR81Q562E7 1941 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 USP2O75604 605 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 KLK7P49862 253 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 KRT83P78385 493 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 KRT76Q01546 638 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 KCNMA1Q12791 1236 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 MAPK7Q13164 816 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 MTMR1Q13613 665 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 SLC5A9Q2M3M2 681 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 TBC1D25Q3MII6 688 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 CCDC122Q5T0U0 273 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 STXBP4Q6ZWJ1 553 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 MIER3Q7Z3K6 550 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 SLX1AQ9BQ83 275 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 MKNK1Q9BUB5 465 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 ST6GALNAC4Q9H4F1 302 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 AGPAT5Q9NUQ2 364 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 CEP72Q9P209 647 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 CTDP1Q9Y5B0 961 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 SNCAIPQ9Y6H5 919 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 NFASCO94856 1347 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 MYBP10242 640 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 RPL13P26373 211 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 CCND2P30279 289 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 GGCXP38435 758 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 EPS15P42566 896 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 VSIG10LQ86VR7 867 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 C4orf19Q8IY42 314 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
SNRNP200-208ENST00000497539 HAUS4Q9H6D7 363 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms