RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 ADAM2Q99965 735 aa20.9■□□□□ 0.94
RPN1-208ENST00000497415 C17orf80Q9BSJ5 609 aa20.9■□□□□ 0.94
RPN1-208ENST00000497415 C1orf112Q9NSG2 853 aa20.9■□□□□ 0.94
RPN1-208ENST00000497415 SUCLA2Q9P2R7 463 aaPredicted RBP20.9■□□□□ 0.94
RPN1-208ENST00000497415 GTF3C3Q9Y5Q9 886 aa20.9■□□□□ 0.94
RPN1-208ENST00000497415 PRRC2BQ5JSZ5 2229 aaKnown RBP20.89■□□□□ 0.94
RPN1-208ENST00000497415 ADGRA3Q8IWK6 1321 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 POTEMA6NI47 508 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 C9IYK1 514 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 ZBTB39O15060 712 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 LINC00271P0C7V0 271 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 SLC24A5Q71RS6 500 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 ZNF410Q86VK4 478 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 FIBCD1Q8N539 461 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 NLRP7Q8WX94 980 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 SLC7A3Q8WY07 619 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 ZNF668Q96K58 619 aaPredicted RBP20.89■□□□□ 0.93
RPN1-208ENST00000497415 ANKEF1Q9NU02 776 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 LMCD1Q9NZU5 365 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 MTUS1Q9ULD2 1270 aa20.89■□□□□ 0.93
RPN1-208ENST00000497415 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.89■□□□□ 0.93
RPN1-208ENST00000497415 EYSQ5T1H1 3165 aa20.88■□□□□ 0.93
RPN1-208ENST00000497415 DENND3A2RUS2 1198 aa20.88■□□□□ 0.93
RPN1-208ENST00000497415 GTPBP6O43824 516 aaPredicted RBP20.88■□□□□ 0.93
RPN1-208ENST00000497415 FAM189BP81408 668 aa20.88■□□□□ 0.93
RPN1-208ENST00000497415 CUL4AQ13619 759 aa20.88■□□□□ 0.93
RPN1-208ENST00000497415 EPC2Q52LR7 807 aa20.88■□□□□ 0.93
RPN1-208ENST00000497415 XKR9Q5GH70 373 aa20.88■□□□□ 0.93
RPN1-208ENST00000497415 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.88■□□□□ 0.93
RPN1-208ENST00000497415 GDPD5Q8WTR4 605 aa20.88■□□□□ 0.93
RPN1-208ENST00000497415 GCOM2Q9BZD3 368 aaPredicted RBP20.88■□□□□ 0.93
RPN1-208ENST00000497415 SMC3Q9UQE7 1217 aa20.88■□□□□ 0.93
RPN1-208ENST00000497415 A0A087WZ62 844 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 GAS2O43903 313 aaKnown RBP20.87■□□□□ 0.93
RPN1-208ENST00000497415 SPATA31C1P0DKV0 1188 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 XRCC6P12956 609 aaKnown RBP eCLIP20.87■□□□□ 0.93
RPN1-208ENST00000497415 TECP42680 631 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 POLGP54098 1239 aaPredicted RBP20.87■□□□□ 0.93
RPN1-208ENST00000497415 NBR1Q14596 966 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 RHPN2Q8IUC4 686 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 TMEM192Q8IY95 271 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 CMTR2Q8IYT2 770 aaKnown RBP20.87■□□□□ 0.93
RPN1-208ENST00000497415 FBXO22Q8NEZ5 403 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 PPM1EQ8WY54 764 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 CLP1Q92989 425 aaKnown RBP20.87■□□□□ 0.93
RPN1-208ENST00000497415 SCLT1Q96NL6 688 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 FDXACB1Q9BRP7 624 aaPredicted RBP20.87■□□□□ 0.93
RPN1-208ENST00000497415 TUFT1Q9NNX1 390 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 RNF216Q9NWF9 866 aaPredicted RBP20.87■□□□□ 0.93
RPN1-208ENST00000497415 PCDHB6Q9Y5E3 794 aa20.87■□□□□ 0.93
RPN1-208ENST00000497415 FNDC1Q4ZHG4 1894 aaPredicted RBP20.86■□□□□ 0.93
RPN1-208ENST00000497415 BTG3Q14201 252 aaPredicted RBP20.86■□□□□ 0.93
RPN1-208ENST00000497415 CCDC85BQ15834 202 aaPredicted RBP20.86■□□□□ 0.93
RPN1-208ENST00000497415 CATSPER3Q86XQ3 398 aa20.86■□□□□ 0.93
RPN1-208ENST00000497415 POLR3CQ9BUI4 534 aaPredicted RBP20.86■□□□□ 0.93
RPN1-208ENST00000497415 INO80BQ9C086 356 aaPredicted RBP20.86■□□□□ 0.93
RPN1-208ENST00000497415 ELAC1Q9H777 363 aaKnown RBP20.86■□□□□ 0.93
RPN1-208ENST00000497415 LRFN2Q9ULH4 789 aa20.86■□□□□ 0.93
RPN1-208ENST00000497415 PCDHB7Q9Y5E2 793 aa20.86■□□□□ 0.93
RPN1-208ENST00000497415 COL4A3BPQ9Y5P4 624 aa20.86■□□□□ 0.93
RPN1-208ENST00000497415 C5orf67F2Z3F1 127 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 H3BNC9 293 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 ZSCAN20P17040 1043 aaPredicted RBP20.85■□□□□ 0.93
RPN1-208ENST00000497415 RARRES1P49788 294 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 FXR2P51116 673 aaKnown RBP eCLIP20.85■□□□□ 0.93
RPN1-208ENST00000497415 EMC2Q15006 297 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 MCTP1Q6DN14 999 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 KSR1Q8IVT5 923 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 TCP11Q8WWU5 503 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 PRPF31Q8WWY3 499 aaKnown RBP20.85■□□□□ 0.93
RPN1-208ENST00000497415 PSPC1Q8WXF1 523 aaKnown RBP20.85■□□□□ 0.93
RPN1-208ENST00000497415 TMEM143Q96AN5 459 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 IFT122Q9HBG6 1241 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 XPNPEP1Q9NQW7 623 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.85■□□□□ 0.93
RPN1-208ENST00000497415 RWDD3Q9Y3V2 267 aa20.85■□□□□ 0.93
RPN1-208ENST00000497415 PRUNE2Q8WUY3 3088 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 KIAA1671Q9BY89 1806 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 H3BQV1 296 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 ASAP2O43150 1006 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 MED24O75448 989 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 CSDE1O75534 798 aaKnown RBP20.84■□□□□ 0.93
RPN1-208ENST00000497415 RB1P06400 928 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 FGFR4P22455 802 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 RPA1P27694 616 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 BMPR1AP36894 532 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 PTGDRQ13258 359 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 RILPL1Q5EBL4 403 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 MTRQ99707 1265 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 CHST12Q9NRB3 414 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 TMEM161AQ9NX61 479 aa20.84■□□□□ 0.93
RPN1-208ENST00000497415 LAD1O00515 517 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 DGAT1O75907 488 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 MUTP22033 750 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 SFPQP23246 707 aaKnown RBP eCLIP20.83■□□□□ 0.93
RPN1-208ENST00000497415 LAMTOR4Q0VGL1 99 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 GPM6BQ13491 265 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 PDIA5Q14554 519 aa20.83■□□□□ 0.93
RPN1-208ENST00000497415 LARP1BQ659C4 914 aaKnown RBP20.83■□□□□ 0.93
RPN1-208ENST00000497415 FERMT3Q86UX7 667 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms