RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, human

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIT-208	ENST00000497382	LARGE1	O95461	756 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	TKT	P29401	623 aa	Known RBP	10.36	□□□□□ -0.75
VIT-208	ENST00000497382	PRELP	P51888	382 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	POLE2	P56282	527 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	MYL6	P60660	151 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	SGSM1	Q2NKQ1	1148 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	ARL13B	Q3SXY8	428 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	PRPF38B	Q5VTL8	546 aa	Known RBP	10.36	□□□□□ -0.75
VIT-208	ENST00000497382	IL31	Q6EBC2	164 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.36	□□□□□ -0.75
VIT-208	ENST00000497382	SLC22A8	Q8TCC7	542 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	ADAMTS19	Q8TE59	1207 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	ANKRD27	Q96NW4	1050 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	CARD14	Q9BXL6	1004 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	API5	Q9BZZ5	524 aa	Known RBP	10.36	□□□□□ -0.75
VIT-208	ENST00000497382	HOMER2	Q9NSB8	354 aa		10.36	□□□□□ -0.75
VIT-208	ENST00000497382	IQANK1	A0A1B0GTG1	560 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	SPDYE5	A6NIY4	337 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	ALDH1L1	O75891	902 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	PFKP	Q01813	784 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	TTLL12	Q14166	644 aa	Predicted RBP	10.35	□□□□□ -0.75
VIT-208	ENST00000497382	P3H1	Q32P28	736 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	ACCSL	Q4AC99	568 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	NCAPH2	Q6IBW4	605 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	AFAP1L1	Q8TED9	768 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	MED30	Q96HR3	178 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	NUP58	Q9BVL2	599 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	CRNN	Q9UBG3	495 aa	Predicted RBP	10.35	□□□□□ -0.75
VIT-208	ENST00000497382	DSE	Q9UL01	958 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	WDR90	Q96KV7	1748 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	GOLGA8CP	A6NN73	597 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	KMO	O15229	486 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	SNX4	O95219	450 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	NPPA	P01160	153 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	ZNF3	P17036	446 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	CTNNA1	P35221	906 aa	Known RBP	10.35	□□□□□ -0.75
VIT-208	ENST00000497382	ATP5O	P48047	213 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	SERPINB4	P48594	390 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	AARS	P49588	968 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
VIT-208	ENST00000497382	NEK3	P51956	506 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	ASIC2	Q16515	512 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	HDX	Q7Z353	690 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	LSMEM1	Q8N8F7	131 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	OSCP1	Q8WVF1	389 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	C12orf10	Q9HB07	376 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	PIDD1	Q9HB75	910 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	PDE11A	Q9HCR9	933 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	KCND1	Q9NSA2	647 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	SEC63	Q9UGP8	760 aa	Known RBP	10.35	□□□□□ -0.75
VIT-208	ENST00000497382	SPG7	Q9UQ90	795 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	TMX2	Q9Y320	296 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	ATP6V1D	Q9Y5K8	247 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	SH3TC1	Q8TE82	1336 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.35	□□□□□ -0.75
VIT-208	ENST00000497382	NFAT5	O94916	1531 aa		10.35	□□□□□ -0.75
VIT-208	ENST00000497382	C17orf113	A0A1B0GUU1	675 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	FAM170A	A1A519	330 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	TIPRL	O75663	272 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	PTGS1	P23219	599 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	PSMA4	P25789	261 aa	Known RBP	10.34	□□□□□ -0.75
VIT-208	ENST00000497382	KRT9	P35527	623 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	CBX5	P45973	191 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	MYO1E	Q12965	1108 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	RTKN2	Q8IZC4	609 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	FUK	Q8N0W3	1084 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	MRPL9	Q9BYD2	267 aa	Known RBP	10.34	□□□□□ -0.75
VIT-208	ENST00000497382	CEP44	Q9C0F1	390 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.34	□□□□□ -0.75
VIT-208	ENST00000497382	TBC1D22B	Q9NU19	505 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.34	□□□□□ -0.75
VIT-208	ENST00000497382	L3MBTL1	Q9Y468	752 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	FAM208A	Q9UK61	1670 aa	Known RBP	10.34	□□□□□ -0.75
VIT-208	ENST00000497382	DPPA5	A6NC42	116 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	GOLGA8J	A6NMD2	632 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	GOLGA8T	H3BQL2	631 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	ZBTB43	O43298	467 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	COBL	O75128	1261 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	OR5F1	O95221	314 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	GOLGA8H	P0CJ92	632 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	CYP2C9	P11712	490 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	CTRB1	P17538	263 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	STAT6	P42226	847 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	TRAP1	Q12931	704 aa	Known RBP	10.34	□□□□□ -0.75
VIT-208	ENST00000497382	SSPN	Q14714	243 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	MAP3K11	Q16584	847 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	CTRB2	Q6GPI1	263 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	DNAJC5G	Q8N7S2	189 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	IRGQ	Q8WZA9	623 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	ALKBH8	Q96BT7	664 aa	Known RBP	10.34	□□□□□ -0.75
VIT-208	ENST00000497382	THAP11	Q96EK4	314 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	LPIN3	Q9BQK8	851 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	OSBPL1A	Q9BXW6	950 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	CABP2	Q9NPB3	220 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	C8orf4	Q9NR00	106 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	LRRC4B	Q9NT99	713 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	EMC3	Q9P0I2	261 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	VTI1B	Q9UEU0	232 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	PARP2	Q9UGN5	583 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	HEY1	Q9Y5J3	304 aa		10.34	□□□□□ -0.75
VIT-208	ENST00000497382	SLC4A7	Q9Y6M7	1214 aa		10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms