RNA–Protein interactions for RNA: ENST00000497250.5

CBWD5-233, Transcript of COBW domain containing 5, human

TSL 1 (best)

Gene CBWD5, Length 1,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD5-233	ENST00000497250	TMEM173	Q86WV6	379 aa	Predicted RBP	18.78	■□□□□ 0.6
CBWD5-233	ENST00000497250	HELQ	Q8TDG4	1101 aa		18.78	■□□□□ 0.6
CBWD5-233	ENST00000497250	ZNF668	Q96K58	619 aa	Predicted RBP	18.78	■□□□□ 0.6
CBWD5-233	ENST00000497250	RTP3	Q9BQQ7	232 aa		18.78	■□□□□ 0.6
CBWD5-233	ENST00000497250	ZBP1	Q9H171	429 aa		18.78	■□□□□ 0.6
CBWD5-233	ENST00000497250	DZANK1	Q9NVP4	752 aa		18.78	■□□□□ 0.6
CBWD5-233	ENST00000497250	VPS13A	Q96RL7	3174 aa		18.78	■□□□□ 0.6
CBWD5-233	ENST00000497250		A0A0U1RQF3	1178 aa		18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	PRC1	O43663	620 aa		18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	GSPT1	P15170	499 aa	Known RBP	18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	ALDH7A1	P49419	539 aa	Known RBP	18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	CLCN3	P51790	818 aa		18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	MIS18BP1	Q6P0N0	1132 aa		18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	NFXL1	Q6ZNB6	911 aa		18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	KCNG4	Q8TDN1	519 aa		18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	BBX	Q8WY36	941 aa	Predicted RBP	18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	KCNK12	Q9HB15	430 aa		18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	MAFB	Q9Y5Q3	323 aa	Predicted RBP	18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	IRAK3	Q9Y616	596 aa		18.77	■□□□□ 0.6
CBWD5-233	ENST00000497250	GVINP1	Q7Z2Y8	2422 aa		18.77	■□□□□ 0.59
CBWD5-233	ENST00000497250	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	CCDC69	A6NI79	296 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	SH2B2	O14492	632 aa	Predicted RBP	18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	LMNA	P02545	664 aa	Known RBP	18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	EIF4B	P23588	611 aa	Known RBP	18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	CHML	P26374	656 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	BMS1	Q14692	1282 aa	Known RBP	18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	WWC2	Q6AWC2	1192 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	CASC1	Q6TDU7	716 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	GPR149	Q86SP6	731 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	CKAP2L	Q8IYA6	745 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	SIX5	Q8N196	739 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	TMTC2	Q8N394	836 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	LINC01465	Q8N7H1	131 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	ACSF2	Q96CM8	615 aa	Predicted RBP	18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	RIC8A	Q9NPQ8	531 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	DUSP12	Q9UNI6	340 aa		18.76	■□□□□ 0.59
CBWD5-233	ENST00000497250	FOS	P01100	380 aa	Predicted RBP	18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	CTSA	P10619	480 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	FGFR4	P22455	802 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	EFCAB12	Q6NXP0	572 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	TMTC3	Q6ZXV5	915 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	DGLUCY	Q7Z3D6	616 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	CABP7	Q86V35	215 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	KIAA2013	Q8IYS2	634 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	FANCB	Q8NB91	859 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	TMEM87A	Q8NBN3	555 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	MAP4K1	Q92918	833 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	TMEM169	Q96HH4	297 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	MTA3	Q9BTC8	594 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	ANO3	Q9BYT9	981 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	FBXL21	Q9UKT6	434 aa		18.75	■□□□□ 0.59
CBWD5-233	ENST00000497250	FAM86B1	E9PN63	330 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	NARS	O43776	548 aa	Known RBP	18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	FAM86B2	P0C5J1	330 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	ZNF76	P36508	570 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	NIPA1	Q7RTP0	329 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	OTOP3	Q7RTS5	596 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	DDX53	Q86TM3	631 aa	Known RBP	18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	PLA2G4D	Q86XP0	818 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	LRRC71	Q8N4P6	559 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	RUFY2	Q8WXA3	655 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	SEMA4A	Q9H3S1	761 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	AKT3	Q9Y243	479 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250		R4GN57	208 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	MAGEB2	O15479	319 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	CALM1	P0DP23	149 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	CALM2	P0DP24	149 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	CALM3	P0DP25	149 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	SREBF1	P36956	1147 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	LIFR	P42702	1097 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	POLG	P54098	1239 aa	Predicted RBP	18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	GIT2	Q14161	759 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	IGSF21	Q96ID5	467 aa		18.74	■□□□□ 0.59
CBWD5-233	ENST00000497250	IGLV3-22	A0A075B6J6	115 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	KRBA1	A5PL33	1030 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	SGSM2	O43147	1006 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	CSDE1	O75534	798 aa	Known RBP	18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	GALT	P07902	379 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	DARS	P14868	501 aa	Known RBP	18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	NAPA	P54920	295 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	RSAD2	Q8WXG1	361 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	TMEM87B	Q96K49	555 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	VN1R3	Q9BXE9	311 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	MRPL9	Q9BYD2	267 aa	Known RBP	18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	NRDE2	Q9H7Z3	1164 aa		18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	RBM8A	Q9Y5S9	174 aa	Known RBP	18.73	■□□□□ 0.59
CBWD5-233	ENST00000497250	SMCO2	A6NFE2	343 aa		18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	IPO5	O00410	1097 aa	Known RBP	18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	STK25	O00506	426 aa		18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	N4BP1	O75113	896 aa	Known RBP	18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	CFH	P08603	1231 aa		18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	MCM5	P33992	734 aa		18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	CLK2	P49760	499 aa	Known RBP	18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	GPC3	P51654	580 aa		18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	TTC22	Q5TAA0	569 aa		18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	CCDC149	Q6ZUS6	474 aa		18.72	■□□□□ 0.59
CBWD5-233	ENST00000497250	RIN2	Q8WYP3	895 aa	Predicted RBP	18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms