RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 JAMLQ86YT9 394 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 KLHDC4Q8TBB5 520 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 CPLX3Q8WVH0 158 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 HAUS7Q99871 368 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 CNTD2Q9H8S5 307 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 RIPOR2Q9Y4F9 1068 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 TRPM7Q96QT4 1865 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ZNF804BA4D1E1 1349 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 PASKQ96RG2 1323 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 POLR2AP24928 1970 aaKnown RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 VIL1P09327 827 aaKnown RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 UBTFL1P0CB47 393 aaPredicted RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 PI3P19957 117 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ENDOUP21128 410 aaKnown RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 TACR1P25103 407 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ARL4AP40617 200 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 BUD31P41223 144 aaPredicted RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 NCKAP1LP55160 1127 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 MVKQ03426 396 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 COL9A2Q14055 689 aaPredicted RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 TNIP1Q15025 636 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 TCEAL1Q15170 157 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 DPY19L1Q2PZI1 675 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 LRRC24Q50LG9 513 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 C15orf52Q6ZUT6 534 aaKnown RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 TMC6Q7Z403 805 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ADAT2Q7Z6V5 191 aaKnown RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 VGLL2Q8N8G2 317 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 DPF2Q92785 391 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 FRAT1Q92837 279 aaPredicted RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 GMLQ99445 158 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ANKRD2Q9GZV1 360 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ACSL6Q9UKU0 697 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 SF3B6Q9Y3B4 125 aaKnown RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 LRRFIP2Q9Y608 721 aaKnown RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 MYH13Q9UKX3 1938 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ECM29Q5VYK3 1845 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 TPM2P07951 284 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 CDR1P51861 262 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 YBX1P67809 324 aaKnown RBP5.98□□□□□ -1.45
CSMD3-208ENST00000497026 LAPTM5Q13571 262 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 TAF7LQ5H9L4 462 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 DACT2Q5SW24 774 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 ZKSCAN2Q63HK3 967 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 HEATR6Q6AI08 1181 aaKnown RBP5.98□□□□□ -1.45
CSMD3-208ENST00000497026 USP50Q70EL3 339 aaPredicted RBP5.98□□□□□ -1.45
CSMD3-208ENST00000497026 PNMA8AQ86V59 439 aaPredicted RBP5.98□□□□□ -1.45
CSMD3-208ENST00000497026 TMEM57Q8N5G2 664 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 DNAJC5GQ8N7S2 189 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 RASGRP4Q8TDF6 673 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 MCMBPQ9BTE3 642 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 MXD3Q9BW11 206 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 COA1Q9GZY4 146 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 CD209Q9NNX6 404 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 CNNM1Q9NRU3 951 aa5.98□□□□□ -1.45
CSMD3-208ENST00000497026 ADARB2Q9NS39 739 aaKnown RBP5.98□□□□□ -1.45
CSMD3-208ENST00000497026 CNOT7Q9UIV1 285 aaKnown RBP5.98□□□□□ -1.45
CSMD3-208ENST00000497026 EYA2O00167 538 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 IPO8O15397 1037 aaKnown RBP5.97□□□□□ -1.45
CSMD3-208ENST00000497026 FGF10O15520 208 aaPredicted RBP5.97□□□□□ -1.45
CSMD3-208ENST00000497026 PLIN1O60240 522 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 EPHX1P07099 455 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 RPS12P25398 132 aaKnown RBP5.97□□□□□ -1.45
CSMD3-208ENST00000497026 NOP2P46087 812 aaKnown RBP5.97□□□□□ -1.45
CSMD3-208ENST00000497026 GJA8P48165 433 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 SLC7A5Q01650 507 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 MTX1Q13505 466 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 VMACQ2NL98 169 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 HLA-DQA1Q5Y7H0 255 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 RPTNQ6XPR3 784 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 ATG9AQ7Z3C6 839 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 CNTROBQ8N137 903 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 CERS5Q8N5B7 392 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 FAM169BQ8N8A8 192 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 SHDQ96IW2 340 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 TNFRSF12AQ9NP84 129 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 PGAP2Q9UHJ9 254 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 PA2G4Q9UQ80 394 aaKnown RBP5.97□□□□□ -1.45
CSMD3-208ENST00000497026 INPP5FQ9Y2H2 1132 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 HCFC2Q9Y5Z7 792 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 IRAK3Q9Y616 596 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 ASTN2O75129 1339 aaPredicted RBP5.97□□□□□ -1.45
CSMD3-208ENST00000497026 MROH5Q6ZUA9 1318 aa5.97□□□□□ -1.45
CSMD3-208ENST00000497026 COL1A1P02452 1464 aaPredicted RBP5.96□□□□□ -1.45
CSMD3-208ENST00000497026 THSD7BQ9C0I4 1608 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 PNMA6EA0A0J9YXQ4 647 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 STXBP3O00186 592 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 TRAF5O00463 557 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 PDE8BO95263 885 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 GNAI3P08754 354 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 INHBBP09529 407 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 IL1R1P14778 569 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 BMP7P18075 431 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 NCLP19338 710 aaKnown RBP5.96□□□□□ -1.46
CSMD3-208ENST00000497026 FGFR2P21802 821 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 GYG1P46976 350 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 KCNJ4P48050 445 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 ZNF280AP59817 542 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-208ENST00000497026 POU4F1Q01851 419 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms