RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ZNF280DQ6N043 979 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 C16orf59Q7L2K0 433 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 DDX1Q92499 740 aaKnown RBP4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 MTMR8Q96EF0 704 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 YIPF4Q9BSR8 244 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 ALG1Q9BT22 464 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 TRIM8Q9BZR9 551 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 SLC6A20Q9NP91 592 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 AASDHPPTQ9NRN7 309 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 MAPRE3Q9UPY8 281 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 ZNF652Q9Y2D9 606 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 UGGT1Q9NYU2 1555 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 SCAPERQ9BY12 1400 aa4.55□□□□□ -1.68
EXOSC3-208ENST00000496910 SAMD9LQ8IVG5 1584 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 USP9XQ93008 2570 aaPredicted RBP4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 A0A1W2PQ27 194 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 A0A1W2PQ64 194 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 A0A1W2PQC6 194 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 A0A1W2PQD8 194 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 TCRBV5S2A0A599 114 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 OR14I1A6ND48 311 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 MAN2B1O00754 1011 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 NPHP1O15259 732 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 KRT1P04264 644 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 MPOP05164 745 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 SRGAP2CP0DJJ0 459 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 COL6A2P12110 1019 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 SERPINB3P29508 390 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 THBS2P35442 1172 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 EPHA5P54756 1037 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 PRR5P85299 388 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 SIM2Q14190 667 aaPredicted RBP4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 NR1I3Q14994 352 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 RAB3GAP1Q15042 981 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 PCBP1Q15365 356 aaKnown RBP eCLIP4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 TMEM177Q53S58 311 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 CYP4F22Q6NT55 531 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 OTOP1Q7RTM1 612 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 MIB1Q86YT6 1006 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 DCP2Q8IU60 420 aaKnown RBP4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 NOSTRINQ8IVI9 506 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 PAF1Q8N7H5 531 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 IGSF22Q8N9C0 903 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 SEC14L1Q92503 715 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 FBXW5Q969U6 566 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 TIFAQ96CG3 184 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 CHAMP1Q96JM3 812 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 KCNJ15Q99712 375 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 RHOBTB2Q9BYZ6 727 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 GCM1Q9NP62 436 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 OBP2AQ9NY56 170 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 MBD1Q9UIS9 605 aaPredicted RBP4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 PALD1Q9ULE6 856 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 PXDNLA1KZ92 1463 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 CFAP47Q6ZTR5 3102 aa4.54□□□□□ -1.68
EXOSC3-208ENST00000496910 FLNBO75369 2602 aaKnown RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 ZDBF2Q9HCK1 2354 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 F8W031 263 aaPredicted RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 CBX4O00257 560 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 PEX10O60683 326 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 DGKIO75912 1065 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 ABLIM3O94929 683 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 LDHCP07864 332 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 IFIT2P09913 472 aaKnown RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 SRGNP10124 158 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 TRIM27P14373 513 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 PDE6AP16499 860 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 IGFBP6P24592 240 aaPredicted RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 TRAPPC10P48553 1259 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 JAM2P57087 298 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 PURAQ00577 322 aaKnown RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 MAP2K1Q02750 393 aaPredicted RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 ITKQ08881 620 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 SEC23AQ15436 765 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 GFOD2Q3B7J2 385 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 STEAP3Q658P3 488 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 CDCA2Q69YH5 1023 aaPredicted RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 PKN3Q6P5Z2 889 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 HHIPL2Q6UWX4 724 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 NECAB2Q7Z6G3 386 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 ZC3H7AQ8IWR0 971 aaKnown RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 RUNDC1Q96C34 613 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 CHMP4CQ96CF2 233 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 PEX11GQ96HA9 241 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 NEUROD6Q96NK8 337 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 ZHX3Q9H4I2 956 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 BCAS3Q9H6U6 928 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 CNTD2Q9H8S5 307 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 AS3MTQ9HBK9 375 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 SLC5A4Q9NY91 659 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 ASH2LQ9UBL3 628 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 ZNF180Q9UJW8 692 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 SRPK3Q9UPE1 567 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 COA3Q9Y2R0 106 aaPredicted RBP4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 PCDHA5Q9Y5H7 936 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 CCDC88BA6NC98 1476 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 BRCA2P51587 3418 aa4.53□□□□□ -1.68
EXOSC3-208ENST00000496910 E2F8A0AVK6 867 aa4.52□□□□□ -1.69
EXOSC3-208ENST00000496910 GOLGA6CA6NDK9 693 aa4.52□□□□□ -1.69
EXOSC3-208ENST00000496910 GOLGA6BA6NDN3 693 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms