RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 POLD1P28340 1107 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 MC4RP32245 332 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 CNR2P34972 360 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 EPHA7Q15375 998 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 FRMD7Q6ZUT3 714 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 NME9Q86XW9 330 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 WDR48Q8TAF3 677 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 RELTQ969Z4 430 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 HOOK2Q96ED9 719 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 C8orf48Q96LL4 319 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 FOXB1Q99853 325 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 PCGF6Q9BYE7 350 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 ZDHHC5Q9C0B5 715 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 KATNBL1Q9H079 304 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 CDH19Q9H159 772 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 OR10A5Q9H207 317 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 AASDHPPTQ9NRN7 309 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 C14orf119Q9NWQ9 140 aa7.77□□□□□ -1.17
CCDC39-207ENST00000495817 CNOT11Q9UKZ1 510 aaKnown RBP7.77□□□□□ -1.17
CCDC39-207ENST00000495817 CFBP00751 764 aa7.76□□□□□ -1.17
CCDC39-207ENST00000495817 ECE1P42892 770 aa7.76□□□□□ -1.17
CCDC39-207ENST00000495817 IL13RA1P78552 427 aa7.76□□□□□ -1.17
CCDC39-207ENST00000495817 ADCY1Q08828 1119 aa7.76□□□□□ -1.17
CCDC39-207ENST00000495817 WDR72Q3MJ13 1102 aa7.76□□□□□ -1.17
CCDC39-207ENST00000495817 FUBP3Q96I24 572 aaKnown RBP eCLIP7.76□□□□□ -1.17
CCDC39-207ENST00000495817 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
CCDC39-207ENST00000495817 UCKL1Q9NWZ5 548 aa7.76□□□□□ -1.17
CCDC39-207ENST00000495817 USP36Q9P275 1121 aaKnown RBP7.76□□□□□ -1.17
CCDC39-207ENST00000495817 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 GOLGA6L22H0YM25 854 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 B4GALT3O60512 393 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 PTX3P26022 381 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-207ENST00000495817 ETV4P43268 484 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 PTPN21Q16825 1174 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 ABCB5Q2M3G0 1257 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 KANK2Q63ZY3 851 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 ESRP1Q6NXG1 681 aaKnown RBP7.75□□□□□ -1.17
CCDC39-207ENST00000495817 RALYLQ86SE5 291 aaKnown RBP7.75□□□□□ -1.17
CCDC39-207ENST00000495817 RTN4RL1Q86UN2 441 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-207ENST00000495817 KBTBD2Q8IY47 623 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 IFNL2Q8IZJ0 200 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 CCDC136Q96JN2 1154 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 AMNQ9BXJ7 453 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 TOPORSQ9NS56 1045 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-207ENST00000495817 ZIM2Q9NZV7 527 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 DUSP10Q9Y6W6 482 aa7.75□□□□□ -1.17
CCDC39-207ENST00000495817 TRIM75PA6NK02 468 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 FZD9O00144 591 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 ABLIM3O94929 683 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 SCGB1D2O95969 90 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 MYBL2P10244 700 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 RBP3P10745 1247 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 SYN1P17600 705 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 IARSP41252 1262 aaKnown RBP7.74□□□□□ -1.17
CCDC39-207ENST00000495817 TOP3AQ13472 1001 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-207ENST00000495817 CHPFQ8IZ52 775 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 C1orf162Q8NEQ5 155 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-207ENST00000495817 LMBR1Q8WVP7 490 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 TSR2Q969E8 191 aaKnown RBP7.74□□□□□ -1.17
CCDC39-207ENST00000495817 FAXDC2Q96IV6 333 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 TCF7L1Q9HCS4 588 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 INVSQ9Y283 1065 aa7.74□□□□□ -1.17
CCDC39-207ENST00000495817 PRAMEF22A3QJZ6 481 aa7.73□□□□□ -1.17
CCDC39-207ENST00000495817 PRICKLE3O43900 615 aaPredicted RBP7.73□□□□□ -1.17
CCDC39-207ENST00000495817 RFPL1O75677 317 aa7.73□□□□□ -1.17
CCDC39-207ENST00000495817 PLATP00750 562 aa7.73□□□□□ -1.17
CCDC39-207ENST00000495817 APEX1P27695 318 aaKnown RBP7.73□□□□□ -1.17
CCDC39-207ENST00000495817 CSF2RBP32927 897 aa7.73□□□□□ -1.17
CCDC39-207ENST00000495817 ALDH6A1Q02252 535 aaKnown RBP7.73□□□□□ -1.17
CCDC39-207ENST00000495817 MAP3K12Q12852 859 aa7.73□□□□□ -1.17
CCDC39-207ENST00000495817 USP10Q14694 798 aaKnown RBP7.73□□□□□ -1.17
CCDC39-207ENST00000495817 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
CCDC39-207ENST00000495817 FOXRED1Q96CU9 486 aaPredicted RBP7.73□□□□□ -1.17
CCDC39-207ENST00000495817 ACAP3Q96P50 834 aa7.73□□□□□ -1.17
CCDC39-207ENST00000495817 CARD11Q9BXL7 1154 aa7.73□□□□□ -1.17
CCDC39-207ENST00000495817 GOLGA8AA7E2F4 631 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 GOLGA8BA8MQT2 603 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 LAMTOR5O43504 91 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 FOXD2O60548 495 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-207ENST00000495817 CCND1P24385 295 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 SCAND1P57086 179 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 ROM1Q03395 351 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 LRRC41Q15345 812 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 ZNF568Q3ZCX4 644 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 TMEM240Q5SV17 173 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 TMEM200BQ69YZ2 307 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 PGM2L1Q6PCE3 622 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 ORAI2Q96SN7 254 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 RTFDC1Q9BY42 306 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-207ENST00000495817 ZNF180Q9UJW8 692 aa7.72□□□□□ -1.17
CCDC39-207ENST00000495817 KIF3BO15066 747 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 KDM1AO60341 852 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 SNUPNO95149 360 aaKnown RBP7.71□□□□□ -1.18
CCDC39-207ENST00000495817 MT-CO1P00395 513 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 PRLP01236 227 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 HMGCRP04035 888 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 CELA3BP08861 270 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 RECQLP46063 649 aaPredicted RBP7.71□□□□□ -1.18
CCDC39-207ENST00000495817 GPR3P46089 330 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 EPHB4P54760 987 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms