RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 NOC2LQ9Y3T9 749 aaKnown RBP10.38□□□□□ -0.75
GARNL3-219ENST00000495172 TRPV2Q9Y5S1 764 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 APC2O95996 2303 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 CACNA1EQ15878 2313 aa10.38□□□□□ -0.75
GARNL3-219ENST00000495172 IGSF9BQ9UPX0 1349 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 CCDC195A0A1B0GUA6 201 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 DENND3A2RUS2 1198 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 ANKRD17O75179 2603 aaKnown RBP10.37□□□□□ -0.75
GARNL3-219ENST00000495172 CAPNS1P04632 268 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 SPATA31D3P0C874 917 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 CLCN4P51793 760 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 SATB1Q01826 763 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 TROAPQ12815 778 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 PTPN13Q12923 2485 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 SEMA3FQ13275 785 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 ZBTB41Q5SVQ8 909 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 TAF2Q6P1X5 1199 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 SPATA31D4Q6ZUB0 917 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 TPRG1Q6ZUI0 275 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 PROSER1Q86XN7 944 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 RNF169Q8NCN4 708 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 GLIS3Q8NEA6 775 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 OSBP2Q969R2 916 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 CLUAP1Q96AJ1 413 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 PDCD2LQ9BRP1 358 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 ATP6V0A4Q9HBG4 840 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 NDRG2Q9UN36 371 aaKnown RBP10.37□□□□□ -0.75
GARNL3-219ENST00000495172 SHROOM3Q8TF72 1996 aa10.37□□□□□ -0.75
GARNL3-219ENST00000495172 WDR19Q8NEZ3 1342 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 M0R2C6 588 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 OPLAHO14841 1288 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 CFBP00751 764 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 APPP05067 770 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 HOXA13P31271 388 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-219ENST00000495172 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 UBE3CQ15386 1083 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 CLLU1OSQ5K130 101 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 RGS22Q8NE09 1264 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 USP26Q9BXU7 913 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 MAN1C1Q9NR34 630 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 RGS18Q9NS28 235 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 C2orf42Q9NWW7 574 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 MYH6P13533 1939 aa10.36□□□□□ -0.75
GARNL3-219ENST00000495172 F5P12259 2224 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 SPAG17Q6Q759 2223 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 ACACAQ13085 2346 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 MBLAC1A4D2B0 266 aaPredicted RBP10.35□□□□□ -0.75
GARNL3-219ENST00000495172 TSPY2A6NKD2 308 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 C4orf47A7E2U8 309 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 INPPL1O15357 1258 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 CNPP09543 421 aaKnown RBP10.35□□□□□ -0.75
GARNL3-219ENST00000495172 KLRC2P26717 231 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 PPM1AP35813 382 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 BCAR1P56945 870 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 C19orf57Q0VDD7 668 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 RNF43Q68DV7 783 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 ZNF707Q96C28 371 aaPredicted RBP10.35□□□□□ -0.75
GARNL3-219ENST00000495172 KLHL5Q96PQ7 755 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 KXD1Q9BQD3 176 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 TMEM47Q9BQJ4 181 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 CELF4Q9BZC1 486 aaKnown RBP10.35□□□□□ -0.75
GARNL3-219ENST00000495172 TMEM117Q9H0C3 514 aa10.35□□□□□ -0.75
GARNL3-219ENST00000495172 ZNF806P0C7X5 589 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 CTSAP10619 480 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 PDHBP11177 359 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 NTHL1P78549 312 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 PGM5Q15124 567 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 CDC37Q16543 378 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-219ENST00000495172 C15orf39Q6ZRI6 1047 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 SLC24A5Q71RS6 500 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 CEP68Q76N32 757 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 VSIG10LQ86VR7 867 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 LRRC43Q8N309 656 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 HELQQ8TDG4 1101 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 SMG7Q92540 1137 aaKnown RBP10.34□□□□□ -0.75
GARNL3-219ENST00000495172 FAM126AQ9BYI3 521 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-219ENST00000495172 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.34□□□□□ -0.75
GARNL3-219ENST00000495172 HEBP1Q9NRV9 189 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 TMEM161AQ9NX61 479 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 RTEL1Q9NZ71 1219 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 ZNF215Q9UL58 517 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-219ENST00000495172 ST3GAL5Q9UNP4 418 aa10.34□□□□□ -0.75
GARNL3-219ENST00000495172 C2CD2LO14523 706 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 B4GALT3O60512 393 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 RANBP6O60518 1105 aaKnown RBP10.33□□□□□ -0.76
GARNL3-219ENST00000495172 HSPD1P10809 573 aaKnown RBP10.33□□□□□ -0.76
GARNL3-219ENST00000495172 PRKCQQ04759 706 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 PPARAQ07869 468 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 ZNF543Q08ER8 600 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 GAS6Q14393 721 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 LONRF3Q496Y0 759 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 IER5Q5VY09 327 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 IFNL3Q8IZI9 196 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 NXPE3Q969Y0 559 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 TMEM169Q96HH4 297 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 MKNK1Q9BUB5 465 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 OSBPL6Q9BZF3 934 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 MRS2Q9HD23 443 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms