RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 HOXA2O43364 376 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 ZSCAN20P17040 1043 aaPredicted RBP24.91■■□□□ 1.58
HDDC3-203ENST00000494993 GPC3P51654 580 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 ERVFC1P60507 584 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 HERC4Q5GLZ8 1057 aaPredicted RBP24.91■■□□□ 1.58
HDDC3-203ENST00000494993 PDE12Q6L8Q7 609 aaKnown RBP24.91■■□□□ 1.58
HDDC3-203ENST00000494993 RUFY3Q7L099 469 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 RNF135Q8IUD6 432 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 GJA10Q969M2 543 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 ZNF668Q96K58 619 aaPredicted RBP24.91■■□□□ 1.58
HDDC3-203ENST00000494993 CASD1Q96PB1 797 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 C22orf23Q9BZE7 217 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 RNF19AQ9NV58 838 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 MUTYHQ9UIF7 546 aa24.91■■□□□ 1.58
HDDC3-203ENST00000494993 FSD2A1L4K1 749 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 FSCN2O14926 492 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 PER2O15055 1255 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 SSRP1Q08945 709 aaKnown RBP24.9■■□□□ 1.58
HDDC3-203ENST00000494993 DUSP6Q16828 381 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 Q4G0T1 1027 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 RDM1Q8NG50 284 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 CDCA3Q99618 268 aaPredicted RBP24.9■■□□□ 1.58
HDDC3-203ENST00000494993 ZSWIM6Q9HCJ5 1215 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 PCDHA4Q9UN74 947 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 LZTS1Q9Y250 596 aa24.9■■□□□ 1.58
HDDC3-203ENST00000494993 PSMD10O75832 226 aa24.89■■□□□ 1.58
HDDC3-203ENST00000494993 DARSP14868 501 aaKnown RBP24.89■■□□□ 1.58
HDDC3-203ENST00000494993 PLCB3Q01970 1234 aa24.89■■□□□ 1.58
HDDC3-203ENST00000494993 TBC1D8BQ0IIM8 1120 aa24.89■■□□□ 1.58
HDDC3-203ENST00000494993 TARBP2Q15633 366 aaKnown RBP24.89■■□□□ 1.58
HDDC3-203ENST00000494993 LRRC55Q6ZSA7 311 aa24.89■■□□□ 1.58
HDDC3-203ENST00000494993 ECHDC2Q86YB7 292 aa24.89■■□□□ 1.58
HDDC3-203ENST00000494993 MRPS27Q92552 414 aaKnown RBP24.89■■□□□ 1.58
HDDC3-203ENST00000494993 USP15Q9Y4E8 981 aaPredicted RBP24.89■■□□□ 1.58
HDDC3-203ENST00000494993 EPB41L2O43491 1005 aaKnown RBP24.88■■□□□ 1.57
HDDC3-203ENST00000494993 TDP2O95551 362 aa24.88■■□□□ 1.57
HDDC3-203ENST00000494993 RBM10P98175 930 aaKnown RBP24.88■■□□□ 1.57
HDDC3-203ENST00000494993 MIER3Q7Z3K6 550 aa24.88■■□□□ 1.57
HDDC3-203ENST00000494993 ABI1Q8IZP0 508 aa24.88■■□□□ 1.57
HDDC3-203ENST00000494993 LRRC43Q8N309 656 aa24.88■■□□□ 1.57
HDDC3-203ENST00000494993 VN1R2Q8NFZ6 395 aa24.88■■□□□ 1.57
HDDC3-203ENST00000494993 SCLT1Q96NL6 688 aa24.88■■□□□ 1.57
HDDC3-203ENST00000494993 CYP3A7-CYP3A51PA0A087WV96 503 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 LOC730098B7Z3J9 87 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 M0R2N6 131 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 DEXIO95424 95 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 CYP3A7P24462 503 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 PLPP4Q5VZY2 271 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 KCNT2Q6UVM3 1135 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 B3GNT9Q6UX72 402 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 BLIDQ8IZY5 108 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 DAGLBQ8NCG7 672 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 NLRP7Q8WX94 980 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 ZNF274Q96GC6 653 aaPredicted RBP24.87■■□□□ 1.57
HDDC3-203ENST00000494993 ZNF558Q96NG5 402 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 SEPT9Q9UHD8 586 aaPredicted RBP24.87■■□□□ 1.57
HDDC3-203ENST00000494993 PUF60Q9UHX1 559 aaKnown RBP24.87■■□□□ 1.57
HDDC3-203ENST00000494993 CYP46A1Q9Y6A2 500 aa24.87■■□□□ 1.57
HDDC3-203ENST00000494993 CPLX1O14810 134 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 FGFR4P22455 802 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 PPM1AP35813 382 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 DRP2Q13474 957 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 MTERF2Q49AM1 385 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 XKR3Q5GH77 459 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 HFE2Q6ZVN8 426 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 RNF169Q8NCN4 708 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 NIFKQ9BYG3 293 aaKnown RBP24.86■■□□□ 1.57
HDDC3-203ENST00000494993 PIEZO1Q92508 2521 aa24.86■■□□□ 1.57
HDDC3-203ENST00000494993 A0A0U1RQF3 1178 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 STBD1O95210 358 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 PBX3P40426 434 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 CBX2Q14781 532 aaPredicted RBP24.85■■□□□ 1.57
HDDC3-203ENST00000494993 NPY5RQ15761 445 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 CLLU1OSQ5K130 101 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 MOXD1Q6UVY6 613 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 ZNF598Q86UK7 904 aaKnown RBP24.85■■□□□ 1.57
HDDC3-203ENST00000494993 FAM177A1Q8N128 213 aaPredicted RBP24.85■■□□□ 1.57
HDDC3-203ENST00000494993 ETNPPLQ8TBG4 499 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 EDAQ92838 391 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 MBOAT7Q96N66 472 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 CEP89Q96ST8 783 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 TCF25Q9BQ70 676 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 PHF7Q9BWX1 381 aaPredicted RBP24.85■■□□□ 1.57
HDDC3-203ENST00000494993 ENTPD7Q9NQZ7 604 aa24.85■■□□□ 1.57
HDDC3-203ENST00000494993 TMEM150BA6NC51 233 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 EOMESO95936 686 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 SRGAP2BP0DMP2 458 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 KCNC3Q14003 757 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 GALNT17Q6IS24 598 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 CPLX2Q6PUV4 134 aaKnown RBP24.84■■□□□ 1.57
HDDC3-203ENST00000494993 TMEM184AQ6ZMB5 413 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 SUSD6Q92537 303 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 AIFM3Q96NN9 605 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 LARP6Q9BRS8 491 aaKnown RBP24.84■■□□□ 1.57
HDDC3-203ENST00000494993 TM6SF1Q9BZW5 370 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 NGRNQ9NPE2 291 aaKnown RBP24.84■■□□□ 1.57
HDDC3-203ENST00000494993 DACT1Q9NYF0 836 aa24.84■■□□□ 1.57
HDDC3-203ENST00000494993 IGKV6-21A0A0C4DH24 114 aa24.83■■□□□ 1.57
HDDC3-203ENST00000494993 ATF7P17544 494 aaPredicted RBP24.83■■□□□ 1.57
HDDC3-203ENST00000494993 CDC42EP1Q00587 391 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms