RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 FAM207AQ9NSI2 230 aaPredicted RBP17.15■□□□□ 0.34
SHISA5-216ENST00000494854 WRAP73Q9P2S5 460 aaPredicted RBP17.15■□□□□ 0.34
SHISA5-216ENST00000494854 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.15■□□□□ 0.34
SHISA5-216ENST00000494854 OGDHLQ9ULD0 1010 aa17.15■□□□□ 0.34
SHISA5-216ENST00000494854 REXO2Q9Y3B8 237 aaKnown RBP17.15■□□□□ 0.34
SHISA5-216ENST00000494854 V9GYY5 206 aaPredicted RBP17.15■□□□□ 0.34
SHISA5-216ENST00000494854 DDX39AO00148 427 aaKnown RBP17.14■□□□□ 0.33
SHISA5-216ENST00000494854 PRPF6O94906 941 aaKnown RBP17.14■□□□□ 0.33
SHISA5-216ENST00000494854 FAM13AO94988 1023 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 NR2F2P24468 414 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 HOXD13P35453 343 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 MRPS9P82933 396 aaKnown RBP17.14■□□□□ 0.33
SHISA5-216ENST00000494854 CDK17Q00537 523 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 KCTD2Q14681 263 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 TRIM59Q8IWR1 403 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 MMP19Q99542 508 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 LXNQ9BS40 222 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 POLD4Q9HCU8 107 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 JADE2Q9NQC1 790 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 DIS3Q9Y2L1 958 aaKnown RBP17.14■□□□□ 0.33
SHISA5-216ENST00000494854 CEP290O15078 2479 aa17.14■□□□□ 0.33
SHISA5-216ENST00000494854 PDXKO00764 312 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 EPHB6O15197 1021 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 CALUO43852 315 aaPredicted RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 GCNT3O95395 438 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 CYLC1P35663 651 aaPredicted RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 ARHGAP25P42331 645 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 RNF207Q6ZRF8 634 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 MIER3Q7Z3K6 550 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 CCDC170Q8IYT3 715 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 LRRN4CLQ8ND94 238 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 AGO4Q9HCK5 861 aaKnown RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 KCND2Q9NZV8 630 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 FAM184BQ9ULE4 1060 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 SFI1A8K8P3 1242 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 DHX15O43143 795 aaKnown RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 ABL1P00519 1130 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 CCND3P30281 292 aaPredicted RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 HNRNPH3P31942 346 aaKnown RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 KCNMA1Q12791 1236 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 PGM5Q15124 567 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 LHX8Q68G74 356 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 CCDC155Q8N6L0 562 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 BANK1Q8NDB2 785 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 NEK11Q8NG66 645 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 MAML3Q96JK9 1138 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 HTATIP2Q9BUP3 242 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 TYW1Q9NV66 732 aaKnown RBP17.13■□□□□ 0.33
SHISA5-216ENST00000494854 MYO1AQ9UBC5 1043 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 MRFAP1Q9Y605 127 aa17.13■□□□□ 0.33
SHISA5-216ENST00000494854 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 CYP2C19P33261 490 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 KRT83P78385 493 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 ITGB3BPQ13352 177 aaPredicted RBP17.12■□□□□ 0.33
SHISA5-216ENST00000494854 MTMR1Q13613 665 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 PDCL2Q8N4E4 241 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 MYCT1Q8N699 235 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 EDEM3Q9BZQ6 932 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 PARVGQ9HBI0 331 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 FBXO40Q9UH90 709 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 RIPK3Q9Y572 518 aa17.12■□□□□ 0.33
SHISA5-216ENST00000494854 EIF3CLB5ME19 914 aaKnown RBP17.11■□□□□ 0.33
SHISA5-216ENST00000494854 EIF3DO15371 548 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHISA5-216ENST00000494854 MSCO60682 206 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 ELF2Q15723 593 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 ZNF792Q3KQV3 632 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 RMDN3Q96TC7 470 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 EIF3CQ99613 913 aaKnown RBP17.11■□□□□ 0.33
SHISA5-216ENST00000494854 CARD6Q9BX69 1037 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 PXMP2Q9NR77 195 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 RNF146Q9NTX7 359 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 SEL1LQ9UBV2 794 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 ODF2LQ9ULJ1 636 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 WDR81Q562E7 1941 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 KIAA1217Q5T5P2 1943 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 ASTN1O14525 1302 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 P4HBP07237 508 aaKnown RBP17.11■□□□□ 0.33
SHISA5-216ENST00000494854 CYBAP13498 195 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 ZNF131P52739 623 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 NECAB2Q7Z6G3 386 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 FRMD5Q7Z6J6 570 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 SLC35F6Q8N357 371 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 BAP1Q92560 729 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
SHISA5-216ENST00000494854 DNAJC25-GNG10A0A024R161 153 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 ARHGEF35A5YM69 484 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 LRRC53A6NM62 1247 aa17.1■□□□□ 0.33
SHISA5-216ENST00000494854 IPO7O95373 1038 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms