RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TMTC2Q8N394 836 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 NRG4Q8WWG1 115 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 RNF25Q96BH1 459 aaPredicted RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 HES6Q96HZ4 224 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 RUNDC3BQ96NL0 473 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 FMO2Q99518 471 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 ZNF184Q99676 751 aaPredicted RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 ZMYND12Q9H0C1 365 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 MAPK8IP1Q9UQF2 711 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SHBGP04278 402 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 TROVE2P10155 538 aaKnown RBP eCLIP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 HSPA6P17066 643 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 VARSP26640 1264 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 HOXC9P31274 260 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 RAP1GDS1P52306 607 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 DHX9Q08211 1270 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 FUT2Q10981 343 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 NPY5RQ15761 445 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 ENOX2Q16206 610 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 CWF19L2Q2TBE0 894 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 WDR72Q3MJ13 1102 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 LRRC74BQ6ZQY2 392 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 TRMT10CQ7L0Y3 403 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 RELL1Q8IUW5 271 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 CROCCP3Q8IVE0 287 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SLC15A3Q8IY34 581 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 NKX2-3Q8TAU0 364 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 UBLCP1Q8WVY7 318 aaPredicted RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SPIRE2Q8WWL2 714 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 HIC2Q96JB3 615 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 CNOT6LQ96LI5 555 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 TAOK3Q9H2K8 898 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 CNNM2Q9H8M5 875 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 EPB41L4AQ9HCS5 686 aaPredicted RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 POLD4Q9HCU8 107 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 PNMA3Q9UL41 463 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 USH1CQ9Y6N9 552 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 RGPD8O14715 1765 aaPredicted RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 IPO5O00410 1097 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 DNAJC6O75061 913 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 IL1BP01584 269 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 PLEKP08567 350 aaPredicted RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 CYP11B2P19099 503 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 ITGA6P23229 1130 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 MARK3P27448 753 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SLC1A4P43007 532 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 MATR3P43243 847 aaKnown RBP eCLIP5.18□□□□□ -1.588e-6■□□□□ 8.9
PRKD3-210ENST00000494667 RNASELQ05823 741 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 CTC1Q2NKJ3 1217 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 MUM1Q2TAK8 710 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SLC45A4Q5BKX6 768 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SYCP2LQ5T4T6 812 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 Q6ZNX1 250 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 CHST3Q7LGC8 479 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 RSPH3Q86UC2 560 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SLF2Q8IX21 1173 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 TRIM22Q8IYM9 498 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 MYOCDQ8IZQ8 938 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 RBM46Q8TBY0 533 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 LRRC8CQ8TDW0 803 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SLCO2A1Q92959 643 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 SHISA4Q96DD7 197 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 C7orf25Q9BPX7 421 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 RBM38Q9H0Z9 239 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 DENND2DQ9H6A0 471 aaPredicted RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 GPAMQ9HCL2 828 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 EURLQ9NYK6 297 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 KLHL14Q9P2G3 628 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 UTP11Q9Y3A2 253 aaKnown RBP5.18□□□□□ -1.58
PRKD3-210ENST00000494667 NUMBLQ9Y6R0 609 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 NHSL1Q5SYE7 1610 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 DUOX1Q9NRD9 1551 aa5.18□□□□□ -1.58
PRKD3-210ENST00000494667 NCANO14594 1321 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 RGS16O15492 202 aaPredicted RBP5.17□□□□□ -1.58
PRKD3-210ENST00000494667 TBC1D12O60347 775 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 ATP2C2O75185 946 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 RARGP13631 454 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 VAV1P15498 845 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 CXCR5P32302 372 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 AFMP43652 599 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 SERPINB4P48594 390 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 HADHBP55084 474 aaKnown RBP5.17□□□□□ -1.58
PRKD3-210ENST00000494667 PLCB3Q01970 1234 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 RPS6KA1Q15418 735 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 PDCD4Q53EL6 469 aaKnown RBP5.17□□□□□ -1.58
PRKD3-210ENST00000494667 NAALADL2Q58DX5 795 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 SNX30Q5VWJ9 437 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 DENND2CQ68D51 928 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 PI16Q6UXB8 463 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 TBC1D10CQ8IV04 446 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 NUP93Q8N1F7 819 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 TRPC4APQ8TEL6 797 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 WDR60Q8WVS4 1066 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 HNRNPABQ99729 332 aaKnown RBP5.17□□□□□ -1.58
PRKD3-210ENST00000494667 ERP44Q9BS26 406 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 TBC1D10AQ9BXI6 508 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 ETNK1Q9HBU6 452 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 LRRC4CQ9HCJ2 640 aa5.17□□□□□ -1.58
PRKD3-210ENST00000494667 METTL5Q9NRN9 209 aaKnown RBP5.17□□□□□ -1.58
PRKD3-210ENST00000494667 KRT82Q9NSB4 513 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms