RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 UPF3BQ9BZI7 483 aaKnown RBP26.95■■□□□ 1.9
TTC3-224ENST00000494243 AAASQ9NRG9 546 aa26.95■■□□□ 1.9
TTC3-224ENST00000494243 HCN4Q9Y3Q4 1203 aa26.95■■□□□ 1.9
TTC3-224ENST00000494243 DCXO43602 365 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 STBD1O95210 358 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 DEXIO95424 95 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 TDP2O95551 362 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 GPC3P51654 580 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 BLIDQ8IZY5 108 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 DAGLBQ8NCG7 672 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 MBOAT7Q96N66 472 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 CASD1Q96PB1 797 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 CEP89Q96ST8 783 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 C22orf23Q9BZE7 217 aa26.94■■□□□ 1.9
TTC3-224ENST00000494243 ERVFC1P60507 584 aa26.93■■□□□ 1.9
TTC3-224ENST00000494243 LRRC55Q6ZSA7 311 aa26.93■■□□□ 1.9
TTC3-224ENST00000494243 RDM1Q8NG50 284 aa26.93■■□□□ 1.9
TTC3-224ENST00000494243 TMEM117Q9H0C3 514 aa26.93■■□□□ 1.9
TTC3-224ENST00000494243 CPLX1O14810 134 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 DARSP14868 501 aaKnown RBP26.92■■□□□ 1.9
TTC3-224ENST00000494243 TBC1D8BQ0IIM8 1120 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 COASYQ13057 564 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 DRP2Q13474 957 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 MIER3Q7Z3K6 550 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 SMRP1Q8NCR6 262 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 ETNPPLQ8TBG4 499 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 MICAL1Q8TDZ2 1067 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 NIFKQ9BYG3 293 aaKnown RBP26.92■■□□□ 1.9
TTC3-224ENST00000494243 TLE6Q9H808 572 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 TLR9Q9NR96 1032 aa26.92■■□□□ 1.9
TTC3-224ENST00000494243 TMEM150BA6NC51 233 aa26.91■■□□□ 1.9
TTC3-224ENST00000494243 STK3Q13188 491 aa26.91■■□□□ 1.9
TTC3-224ENST00000494243 CSPP1Q1MSJ5 1256 aa26.91■■□□□ 1.9
TTC3-224ENST00000494243 ECHDC2Q86YB7 292 aa26.91■■□□□ 1.9
TTC3-224ENST00000494243 THNSL1Q8IYQ7 743 aa26.91■■□□□ 1.9
TTC3-224ENST00000494243 POP1Q99575 1024 aaKnown RBP26.91■■□□□ 1.9
TTC3-224ENST00000494243 BARX2Q9UMQ3 279 aaPredicted RBP26.91■■□□□ 1.9
TTC3-224ENST00000494243 FSCN2O14926 492 aa26.9■■□□□ 1.9
TTC3-224ENST00000494243 PER2O15055 1255 aa26.9■■□□□ 1.9
TTC3-224ENST00000494243 ZSCAN20P17040 1043 aaPredicted RBP26.9■■□□□ 1.9
TTC3-224ENST00000494243 LAG3P18627 525 aa26.9■■□□□ 1.9
TTC3-224ENST00000494243 FGFR4P22455 802 aa26.9■■□□□ 1.9
TTC3-224ENST00000494243 XKR3Q5GH77 459 aa26.9■■□□□ 1.9
TTC3-224ENST00000494243 GALNT17Q6IS24 598 aa26.9■■□□□ 1.9
TTC3-224ENST00000494243 MOXD1Q6UVY6 613 aa26.9■■□□□ 1.9
TTC3-224ENST00000494243 FAM177A1Q8N128 213 aaPredicted RBP26.9■■□□□ 1.9
TTC3-224ENST00000494243 C5orf42Q9H799 3197 aa26.89■■□□□ 1.9
TTC3-224ENST00000494243 IGKV6-21A0A0C4DH24 114 aa26.89■■□□□ 1.9
TTC3-224ENST00000494243 RBM10P98175 930 aaKnown RBP26.89■■□□□ 1.9
TTC3-224ENST00000494243 PLCB3Q01970 1234 aa26.89■■□□□ 1.9
TTC3-224ENST00000494243 VN1R2Q8NFZ6 395 aa26.89■■□□□ 1.9
TTC3-224ENST00000494243 PDRG1Q9NUG6 133 aa26.89■■□□□ 1.9
TTC3-224ENST00000494243 LZTS1Q9Y250 596 aa26.89■■□□□ 1.9
TTC3-224ENST00000494243 A0A0U1RQF3 1178 aa26.88■■□□□ 1.89
TTC3-224ENST00000494243 HOXA2O43364 376 aa26.88■■□□□ 1.89
TTC3-224ENST00000494243 CSDE1O75534 798 aaKnown RBP26.88■■□□□ 1.89
TTC3-224ENST00000494243 NONOQ15233 471 aaKnown RBP eCLIP26.88■■□□□ 1.895e-9■■■■□ 22.3
TTC3-224ENST00000494243 DUSP6Q16828 381 aa26.88■■□□□ 1.89
TTC3-224ENST00000494243 MTERF2Q49AM1 385 aa26.88■■□□□ 1.89
TTC3-224ENST00000494243 CLLU1OSQ5K130 101 aa26.88■■□□□ 1.89
TTC3-224ENST00000494243 PDE12Q6L8Q7 609 aaKnown RBP26.88■■□□□ 1.89
TTC3-224ENST00000494243 ZNF598Q86UK7 904 aaKnown RBP26.88■■□□□ 1.89
TTC3-224ENST00000494243 RNF135Q8IUD6 432 aa26.88■■□□□ 1.89
TTC3-224ENST00000494243 SH2D3AQ9BRG2 576 aa26.88■■□□□ 1.89
TTC3-224ENST00000494243 SEPT9Q9UHD8 586 aaPredicted RBP26.88■■□□□ 1.89
TTC3-224ENST00000494243 KCNJ14Q9UNX9 436 aa26.88■■□□□ 1.89
TTC3-224ENST00000494243 SLC37A4O43826 429 aa26.87■■□□□ 1.89
TTC3-224ENST00000494243 ATF7P17544 494 aaPredicted RBP26.87■■□□□ 1.89
TTC3-224ENST00000494243 INF2Q27J81 1249 aa26.87■■□□□ 1.89
TTC3-224ENST00000494243 CPLX2Q6PUV4 134 aaKnown RBP26.87■■□□□ 1.89
TTC3-224ENST00000494243 KCNT2Q6UVM3 1135 aa26.87■■□□□ 1.89
TTC3-224ENST00000494243 NLRP7Q8WX94 980 aa26.87■■□□□ 1.89
TTC3-224ENST00000494243 MRPS27Q92552 414 aaKnown RBP26.87■■□□□ 1.89
TTC3-224ENST00000494243 SCLT1Q96NL6 688 aa26.87■■□□□ 1.89
TTC3-224ENST00000494243 DDX25Q9UHL0 483 aaKnown RBP26.87■■□□□ 1.89
TTC3-224ENST00000494243 PBX3P40426 434 aa26.86■■□□□ 1.89
TTC3-224ENST00000494243 KCNC3Q14003 757 aa26.86■■□□□ 1.89
TTC3-224ENST00000494243 HERC4Q5GLZ8 1057 aaPredicted RBP26.86■■□□□ 1.89
TTC3-224ENST00000494243 KRT25Q7Z3Z0 450 aa26.86■■□□□ 1.89
TTC3-224ENST00000494243 LRRC43Q8N309 656 aa26.86■■□□□ 1.89
TTC3-224ENST00000494243 CDCA3Q99618 268 aaPredicted RBP26.86■■□□□ 1.89
TTC3-224ENST00000494243 PHF20Q9BVI0 1012 aa26.86■■□□□ 1.89
TTC3-224ENST00000494243 MUTYHQ9UIF7 546 aa26.86■■□□□ 1.89
TTC3-224ENST00000494243 USP15Q9Y4E8 981 aaPredicted RBP26.86■■□□□ 1.89
TTC3-224ENST00000494243 DDX11L8A8MPP1 907 aa26.85■■□□□ 1.89
TTC3-224ENST00000494243 EML1O00423 815 aa26.85■■□□□ 1.89
TTC3-224ENST00000494243 EOMESO95936 686 aa26.85■■□□□ 1.89
TTC3-224ENST00000494243 CDC42EP1Q00587 391 aa26.85■■□□□ 1.89
TTC3-224ENST00000494243 SCRN1Q12765 414 aa26.85■■□□□ 1.89
TTC3-224ENST00000494243 ANO5Q75V66 913 aa26.85■■□□□ 1.89
TTC3-224ENST00000494243 RNF169Q8NCN4 708 aa26.85■■□□□ 1.89
TTC3-224ENST00000494243 ZNF558Q96NG5 402 aa26.85■■□□□ 1.89
TTC3-224ENST00000494243 GCOM2Q9BZD3 368 aaPredicted RBP26.85■■□□□ 1.89
TTC3-224ENST00000494243 A0A087WZ62 844 aa26.84■■□□□ 1.89
TTC3-224ENST00000494243 MAFO75444 373 aaPredicted RBP26.84■■□□□ 1.89
TTC3-224ENST00000494243 TMEM184AQ6ZMB5 413 aa26.84■■□□□ 1.89
TTC3-224ENST00000494243 ABI1Q8IZP0 508 aa26.84■■□□□ 1.89
TTC3-224ENST00000494243 FDXACB1Q9BRP7 624 aaPredicted RBP26.84■■□□□ 1.89
TTC3-224ENST00000494243 KCNMB3Q9NPA1 279 aa26.84■■□□□ 1.89
TTC3-224ENST00000494243 CHST12Q9NRB3 414 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms