RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 DENND3A2RUS2 1198 aa16.44■□□□□ 0.22
ATG4B-224ENST00000494132 H3BQV1 296 aa16.44■□□□□ 0.22
ATG4B-224ENST00000494132 POLGP54098 1239 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-224ENST00000494132 ERVK-21P61565 698 aa16.44■□□□□ 0.22
ATG4B-224ENST00000494132 PAN2Q504Q3 1202 aaKnown RBP16.44■□□□□ 0.22
ATG4B-224ENST00000494132 PIGOQ8TEQ8 1089 aa16.44■□□□□ 0.22
ATG4B-224ENST00000494132 TMEM143Q96AN5 459 aa16.44■□□□□ 0.22
ATG4B-224ENST00000494132 NLRP4Q96MN2 994 aa16.44■□□□□ 0.22
ATG4B-224ENST00000494132 FDXACB1Q9BRP7 624 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-224ENST00000494132 PLXNA4Q9HCM2 1894 aa16.44■□□□□ 0.22
ATG4B-224ENST00000494132 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
ATG4B-224ENST00000494132 GPR182O15218 404 aa16.43■□□□□ 0.22
ATG4B-224ENST00000494132 LPXNO60711 386 aa16.43■□□□□ 0.22
ATG4B-224ENST00000494132 EMC2Q15006 297 aa16.43■□□□□ 0.22
ATG4B-224ENST00000494132 HSD17B14Q9BPX1 270 aa16.43■□□□□ 0.22
ATG4B-224ENST00000494132 LRFN2Q9ULH4 789 aa16.43■□□□□ 0.22
ATG4B-224ENST00000494132 PRUNE2Q8WUY3 3088 aa16.43■□□□□ 0.22
ATG4B-224ENST00000494132 TCF20Q9UGU0 1960 aaKnown RBP16.42■□□□□ 0.22
ATG4B-224ENST00000494132 MED24O75448 989 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 DGKIO75912 1065 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 DARSP14868 501 aaKnown RBP16.42■□□□□ 0.22
ATG4B-224ENST00000494132 EIF4BP23588 611 aaKnown RBP16.42■□□□□ 0.22
ATG4B-224ENST00000494132 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 DNM2P50570 870 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 BTG3Q14201 252 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-224ENST00000494132 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 NPAS4Q8IUM7 802 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 FIBCD1Q8N539 461 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 C4orf32Q8N8J7 132 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 FBXO22Q8NEZ5 403 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 SLC7A3Q8WY07 619 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 DHX33Q9H6R0 707 aaKnown RBP16.42■□□□□ 0.22
ATG4B-224ENST00000494132 RC3H2Q9HBD1 1191 aaKnown RBP16.42■□□□□ 0.22
ATG4B-224ENST00000494132 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-224ENST00000494132 MTCH2Q9Y6C9 303 aa16.42■□□□□ 0.22
ATG4B-224ENST00000494132 BRWD1Q9NSI6 2320 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 MYH11P35749 1972 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 GTPBP6O43824 516 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-224ENST00000494132 CSPG5O95196 566 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 SPATA31C1P0DKV0 1188 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 PTGDRQ13258 359 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 DSC3Q14574 896 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 EPC2Q52LR7 807 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 ODR4Q5SWX8 454 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 LARP1BQ659C4 914 aaKnown RBP16.41■□□□□ 0.22
ATG4B-224ENST00000494132 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 CATSPER3Q86XQ3 398 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.41■□□□□ 0.22
ATG4B-224ENST00000494132 TMEM192Q8IY95 271 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 CRIPAKQ8N1N5 446 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 NEK9Q8TD19 979 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 ZNF689Q96CS4 500 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-224ENST00000494132 CCDC43Q96MW1 224 aaKnown RBP16.41■□□□□ 0.22
ATG4B-224ENST00000494132 GCOM2Q9BZD3 368 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-224ENST00000494132 XPNPEP1Q9NQW7 623 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 RGS18Q9NS28 235 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 COL4A3BPQ9Y5P4 624 aa16.41■□□□□ 0.22
ATG4B-224ENST00000494132 C9IYK1 514 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 USO1O60763 962 aaKnown RBP16.4■□□□□ 0.22
ATG4B-224ENST00000494132 STAG3L1P0CL83 205 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 SRGAP2CP0DJJ0 459 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 CTNNB1P35222 781 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 RFC5P40937 340 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 SARSP49591 514 aaKnown RBP16.4■□□□□ 0.22
ATG4B-224ENST00000494132 ORC2Q13416 577 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-224ENST00000494132 FAM102BQ5T8I3 360 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 PRPF31Q8WWY3 499 aaKnown RBP16.4■□□□□ 0.22
ATG4B-224ENST00000494132 MTRQ99707 1265 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 JPH2Q9BR39 696 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-224ENST00000494132 HCSTQ9UBK5 93 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 PCDHB7Q9Y5E2 793 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 MRPL42Q9Y6G3 142 aaKnown RBP16.4■□□□□ 0.22
ATG4B-224ENST00000494132 MYH15Q9Y2K3 1946 aa16.4■□□□□ 0.22
ATG4B-224ENST00000494132 PP2D1A8MPX8 630 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 LYPLA2O95372 231 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 LINC00271P0C7V0 271 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 FGFR1P11362 822 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 ZSCAN20P17040 1043 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-224ENST00000494132 RARRES1P49788 294 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 LAMTOR4Q0VGL1 99 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 GPM6BQ13491 265 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 CUL4AQ13619 759 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 SKIV2LQ15477 1246 aaKnown RBP16.39■□□□□ 0.21
ATG4B-224ENST00000494132 IL17AQ16552 155 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 ECM1Q16610 540 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 SLC24A5Q71RS6 500 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 MAEAQ7L5Y9 396 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 ZNF410Q86VK4 478 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 RNF169Q8NCN4 708 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 PSPC1Q8WXF1 523 aaKnown RBP16.39■□□□□ 0.21
ATG4B-224ENST00000494132 IFT122Q9HBG6 1241 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.39■□□□□ 0.21
ATG4B-224ENST00000494132 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
ATG4B-224ENST00000494132 VPS37CA5D8V6 355 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-224ENST00000494132 TBKBP1A7MCY6 615 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 CCT6AP40227 531 aaKnown RBP16.38■□□□□ 0.21
ATG4B-224ENST00000494132 LONRF3Q496Y0 759 aa16.38■□□□□ 0.21
ATG4B-224ENST00000494132 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms