RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 CNMDO75829 334 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 PSAPP07602 524 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 MAPTP10636 758 aaKnown RBP7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 FCER1AP12319 257 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 GUCY2CP25092 1073 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 MSNP26038 577 aaKnown RBP7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 CDKN1CP49918 316 aaPredicted RBP7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 PSMC5P62195 406 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 ERVK-9P63128 1117 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 ERVK-24P63145 666 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 UBXN2AP68543 259 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 COASYQ13057 564 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 NEDD9Q14511 834 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 CCL15Q16663 113 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 FAM26FQ5R3K3 315 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 OTUD6AQ7L8S5 288 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 MYOCDQ8IZQ8 938 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 FAM133AQ8N9E0 248 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 ATP6V0A1Q93050 837 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 IQCDQ96DY2 449 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 DYDC2Q96IM9 177 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 MMP19Q99542 508 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 ZNF408Q9H9D4 720 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 RBPJLQ9UBG7 517 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 CTNND2Q9UQB3 1225 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 PCDHA10Q9Y5I2 948 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 POTEFA5A3E0 1075 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 ARHGEF35A5YM69 484 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 E9PMD0 336 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 EML1O00423 815 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 GNA14O95837 355 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 POTEIP0CG38 1075 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 IDEP14735 1019 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 FMR1Q06787 632 aaKnown RBP eCLIP7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 FXNQ16595 210 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 ECM1Q16610 540 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 CENPPQ6IPU0 288 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 POTEGQ6S5H5 508 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 POTEEQ6S8J3 1075 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 MOB2Q70IA6 237 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 TPH2Q8IWU9 490 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 CCDC150Q8NCX0 1101 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 IL31RAQ8NI17 732 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 SMCR8Q8TEV9 937 aaPredicted RBP7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 TBC1D20Q96BZ9 403 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 MS4A4AQ96JQ5 239 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 CCDC43Q96MW1 224 aaKnown RBP7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 YY1AP1Q9H869 796 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 CASS4Q9NQ75 786 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 OLFML3Q9NRN5 406 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 SLC5A4Q9NY91 659 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 IFNKQ9P0W0 207 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 LIMA1Q9UHB6 759 aaKnown RBP7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 TMCC3Q9ULS5 477 aa7.37□□□□□ -1.23
FNDC3B-212ENST00000494000 DNAJC25-GNG10A0A024R161 153 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 PDHXO00330 501 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 EIF3DO15371 548 aaKnown RBP eCLIP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 LILRB3O75022 631 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 SSBP05455 408 aaKnown RBP eCLIP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 CD44P16070 742 aaKnown RBP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 CASP1P29466 404 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 GJA5P36382 358 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 TRIM14Q14142 442 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 KLHL10Q6JEL2 608 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 MIS18BP1Q6P0N0 1132 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 KCNK18Q7Z418 384 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 LRRC15Q8TF66 581 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 HHIPL1Q96JK4 782 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 TRIM47Q96LD4 638 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 LXNQ9BS40 222 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 SLC9A2Q9UBY0 812 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 ZNF232Q9UNY5 417 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 SAMM50Q9Y512 469 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 A0A1B0GTH6 734 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 TRAF5O00463 557 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 AP5Z1O43299 807 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 FAM13AO94988 1023 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 TPM1P09493 284 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 MAPK4P31152 587 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 SNRPFP62306 86 aaKnown RBP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 ITGB3BPQ13352 177 aaPredicted RBP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 GIT2Q14161 759 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 EDRF1Q3B7T1 1238 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 HERC4Q5GLZ8 1057 aaPredicted RBP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 RINT1Q6NUQ1 792 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 DLK2Q6UY11 383 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 DYMQ7RTS9 669 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 ARL10Q8N8L6 244 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 SH3KBP1Q96B97 665 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 XPO4Q9C0E2 1151 aaKnown RBP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 HSD3B7Q9H2F3 369 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 TSPYL2Q9H2G4 693 aaPredicted RBP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 BHMT2Q9H2M3 363 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 C17orf75Q9HAS0 396 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 JPH1Q9HDC5 661 aaPredicted RBP7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 TAGLN3Q9UI15 199 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 ZKSCAN5Q9Y2L8 839 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 GDAQ9Y2T3 454 aa7.36□□□□□ -1.23
FNDC3B-212ENST00000494000 A0A087WWV3 80 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms