RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 LYPD4Q6UWN0 246 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 TMTC3Q6ZXV5 915 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 TMCO2Q7Z6W1 182 aaPredicted RBP8.62□□□□□ -1.03
RBM39-238ENST00000493853 SGMS1Q86VZ5 419 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 SEPT1Q8WYJ6 367 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 GLMNQ92990 594 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 TGS1Q96RS0 853 aaKnown RBP8.62□□□□□ -1.03
RBM39-238ENST00000493853 ZNF358Q9NW07 568 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 PCDHA6Q9UN73 950 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 INSL6Q9Y581 213 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 PCDHA8Q9Y5H6 950 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 MTCH2Q9Y6C9 303 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 LRRC37A2A6NM11 1700 aa8.62□□□□□ -1.03
RBM39-238ENST00000493853 FRMPD4Q14CM0 1322 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 LCHNA4D1U4 455 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 ZBTB43O43298 467 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 CDC45O75419 566 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 FOSP01100 380 aaPredicted RBP8.61□□□□□ -1.03
RBM39-238ENST00000493853 THBS1P07996 1170 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 HMGB1P09429 215 aaKnown RBP8.61□□□□□ -1.03
RBM39-238ENST00000493853 POU3F3P20264 500 aaPredicted RBP8.61□□□□□ -1.03
RBM39-238ENST00000493853 ZNF76P36508 570 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 ATP1A2P50993 1020 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 PPFIA1Q13136 1202 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 RTN1Q16799 776 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 PLEKHG4Q58EX7 1191 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 APOA5Q6Q788 366 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 DHX32Q7L7V1 743 aaKnown RBP8.61□□□□□ -1.03
RBM39-238ENST00000493853 APBB2Q92870 758 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 WNT8BQ93098 351 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 UHRF1Q96T88 793 aaPredicted RBP8.61□□□□□ -1.03
RBM39-238ENST00000493853 YME1L1Q96TA2 773 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 SDF4Q9BRK5 362 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 GLT8D2Q9H1C3 349 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 SMARCAD1Q9H4L7 1026 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 AZI2Q9H6S1 392 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 ERAP1Q9NZ08 941 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 COG5Q9UP83 839 aa8.61□□□□□ -1.03
RBM39-238ENST00000493853 CCDC196A0A1B0GTZ2 297 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 LINC01553A4QN01 128 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 SMCO2A6NFE2 343 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 EPOPA6NHQ4 379 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 GOLGA8AA7E2F4 631 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 GOLGA8BA8MQT2 603 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 hCG_1984214I3L0E3 225 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 ATP9AO75110 1047 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 CELA2BP08218 269 aaPredicted RBP8.6□□□□□ -1.03
RBM39-238ENST00000493853 MARK3P27448 753 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 IGBP1P78318 339 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 TFF2Q03403 129 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 GRB10Q13322 594 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 MBTPS1Q14703 1052 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 KRT40Q6A162 431 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 TAF2Q6P1X5 1199 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.6□□□□□ -1.03
RBM39-238ENST00000493853 ZNF713Q8N859 430 aaPredicted RBP8.6□□□□□ -1.03
RBM39-238ENST00000493853 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 LMBR1Q8WVP7 490 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 TCEANC2Q96MN5 208 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 MXRA8Q9BRK3 442 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 IFIH1Q9BYX4 1025 aaKnown RBP8.6□□□□□ -1.03
RBM39-238ENST00000493853 RIC8AQ9NPQ8 531 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 JADE2Q9NQC1 790 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 LMCD1Q9NZU5 365 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 SLC9A2Q9UBY0 812 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 UBIAD1Q9Y5Z9 338 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 USP3Q9Y6I4 520 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 LCTP09848 1927 aa8.6□□□□□ -1.03
RBM39-238ENST00000493853 KLF18A0A0U1RQI7 1052 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 RRN3P2A6NIE6 340 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 M0QZ92 97 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 ARHGEF15O94989 841 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 RPLP2P05387 115 aaKnown RBP8.59□□□□□ -1.03
RBM39-238ENST00000493853 KCNA2P16389 499 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 ITGB5P18084 799 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 HOXC8P31273 242 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 ADCY7P51828 1080 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 MARSP56192 900 aaKnown RBP8.59□□□□□ -1.03
RBM39-238ENST00000493853 ERVK-21P61565 698 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 EXOSC10Q01780 885 aaKnown RBP8.59□□□□□ -1.03
RBM39-238ENST00000493853 AKAP17AQ02040 695 aaKnown RBP8.59□□□□□ -1.03
RBM39-238ENST00000493853 GRIK4Q16099 956 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 TCTN1Q2MV58 587 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
RBM39-238ENST00000493853 WWC2Q6AWC2 1192 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 TEX2Q8IWB9 1127 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 C1orf216Q8TAB5 229 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 GDPD5Q8WTR4 605 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 CCDC12Q8WUD4 166 aaPredicted RBP8.59□□□□□ -1.03
RBM39-238ENST00000493853 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 CALR3Q96L12 384 aaKnown RBP8.59□□□□□ -1.03
RBM39-238ENST00000493853 CRISPLD1Q9H336 500 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 SUGCTQ9HAC7 445 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 JPH1Q9HDC5 661 aaPredicted RBP8.59□□□□□ -1.03
RBM39-238ENST00000493853 ENAMQ9NRM1 1142 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 KCNH7Q9NS40 1196 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 TCEAL9Q9UHQ7 104 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 TUBE1Q9UJT0 475 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 UNC80Q8N2C7 3258 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 LAMA4Q16363 1823 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms