RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 TMEM60Q9H2L4 133 aa13.23□□□□□ -0.29
MDC1-207ENST00000492462 MAFO75444 373 aaPredicted RBP13.22□□□□□ -0.29
MDC1-207ENST00000492462 P4HBP07237 508 aaKnown RBP13.22□□□□□ -0.29
MDC1-207ENST00000492462 TMOD1P28289 359 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 GPM6BQ13491 265 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 BTG3Q14201 252 aaPredicted RBP13.22□□□□□ -0.29
MDC1-207ENST00000492462 DSC3Q14574 896 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 RABEP1Q15276 862 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 EPHA7Q15375 998 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 CALCRLQ16602 461 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 PAN2Q504Q3 1202 aaKnown RBP13.22□□□□□ -0.29
MDC1-207ENST00000492462 NPAS4Q8IUM7 802 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 KSR1Q8IVT5 923 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 LXNQ9BS40 222 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 CYP26B1Q9NR63 512 aa13.22□□□□□ -0.29
MDC1-207ENST00000492462 SH2B1Q9NRF2 756 aaPredicted RBP13.22□□□□□ -0.29
MDC1-207ENST00000492462 BMP2KQ9NSY1 1161 aaPredicted RBP13.22□□□□□ -0.29
MDC1-207ENST00000492462 MRPL42Q9Y6G3 142 aaKnown RBP13.22□□□□□ -0.29
MDC1-207ENST00000492462 A0A087WWV3 80 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 C9IYK1 514 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 H3BNC9 293 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 GPR182O15218 404 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 NEMFO60524 1076 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 DARSP14868 501 aaKnown RBP13.21□□□□□ -0.29
MDC1-207ENST00000492462 EIF4BP23588 611 aaKnown RBP13.21□□□□□ -0.29
MDC1-207ENST00000492462 CTNNB1P35222 781 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 TXKP42681 527 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.29
MDC1-207ENST00000492462 FAM102BQ5T8I3 360 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 SAMD11Q96NU1 681 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 MTMR9Q96QG7 549 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 RGS18Q9NS28 235 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 HCSTQ9UBK5 93 aa13.21□□□□□ -0.29
MDC1-207ENST00000492462 A0A087WZ62 844 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 DENND3A2RUS2 1198 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 GRM6O15303 877 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 SLITRK3O94933 977 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 BAG4O95429 457 aaKnown RBP13.2□□□□□ -0.3
MDC1-207ENST00000492462 MCM7P33993 719 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 BMPR1AP36894 532 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
MDC1-207ENST00000492462 SAFBQ15424 915 aaKnown RBP eCLIP13.2□□□□□ -0.3
MDC1-207ENST00000492462 SLC24A5Q71RS6 500 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 TPH2Q8IWU9 490 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 C4orf19Q8IY42 314 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 NLRP7Q8WX94 980 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 CLP1Q92989 425 aaKnown RBP13.2□□□□□ -0.3
MDC1-207ENST00000492462 CEP170P1Q96L14 293 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 SCLT1Q96NL6 688 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 EIF2AK1Q9BQI3 630 aaKnown RBP13.2□□□□□ -0.3
MDC1-207ENST00000492462 FDXACB1Q9BRP7 624 aaPredicted RBP13.2□□□□□ -0.3
MDC1-207ENST00000492462 TTC12Q9H892 705 aaPredicted RBP13.2□□□□□ -0.3
MDC1-207ENST00000492462 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
MDC1-207ENST00000492462 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 PCDHB7Q9Y5E2 793 aa13.2□□□□□ -0.3
MDC1-207ENST00000492462 POTEMA6NI47 508 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 GPR37L1O60883 481 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 CSPG5O95196 566 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 STAG3L1P0CL83 205 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 FGFR1P11362 822 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 YWHABP31946 246 aaKnown RBP13.19□□□□□ -0.3
MDC1-207ENST00000492462 KCNQ1P51787 676 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 FAM189BP81408 668 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 NBR1Q14596 966 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 ZNF174Q15697 407 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 XKR9Q5GH70 373 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 CMTR2Q8IYT2 770 aaKnown RBP13.19□□□□□ -0.3
MDC1-207ENST00000492462 FAM184AQ8NB25 1140 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 TMEM143Q96AN5 459 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 MRPL38Q96DV4 380 aaKnown RBP13.19□□□□□ -0.3
MDC1-207ENST00000492462 HSD17B14Q9BPX1 270 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 DHX33Q9H6R0 707 aaKnown RBP13.19□□□□□ -0.3
MDC1-207ENST00000492462 ZSWIM4Q9H7M6 989 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 C11orf16Q9NQ32 467 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 C1orf112Q9NSG2 853 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 PLXNA4Q9HCM2 1894 aa13.19□□□□□ -0.3
MDC1-207ENST00000492462 TBKBP1A7MCY6 615 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 C5orf67F2Z3F1 127 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 DKC1O60832 514 aaKnown RBP eCLIP13.18□□□□□ -0.3
MDC1-207ENST00000492462 BMP1P13497 986 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 DNM2P50570 870 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 TMX3Q96JJ7 454 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 TBC1D32Q96NH3 1257 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 FOXP1Q9H334 677 aaPredicted RBP13.18□□□□□ -0.3
MDC1-207ENST00000492462 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
MDC1-207ENST00000492462 XPNPEP1Q9NQW7 623 aa13.18□□□□□ -0.3
MDC1-207ENST00000492462 ST18O60284 1047 aa13.17□□□□□ -0.3
MDC1-207ENST00000492462 RB1P06400 928 aa13.17□□□□□ -0.3
MDC1-207ENST00000492462 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
MDC1-207ENST00000492462 DNAJB1P25685 340 aa13.17□□□□□ -0.3
MDC1-207ENST00000492462 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
MDC1-207ENST00000492462 POLGP54098 1239 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms