RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TXKP42681 527 aa10.46□□□□□ -0.74
BRCA1-219ENST00000491747 PRKCEQ02156 737 aa10.46□□□□□ -0.74
BRCA1-219ENST00000491747 GNL2Q13823 731 aaKnown RBP10.46□□□□□ -0.74
BRCA1-219ENST00000491747 NAA30Q147X3 362 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-219ENST00000491747 TTC38Q5R3I4 469 aa10.46□□□□□ -0.74
BRCA1-219ENST00000491747 ADALQ6DHV7 355 aa10.46□□□□□ -0.74
BRCA1-219ENST00000491747 FAM109BQ6ICB4 259 aaPredicted RBP10.46□□□□□ -0.74
BRCA1-219ENST00000491747 AOPEPQ8N6M6 819 aa10.46□□□□□ -0.74
BRCA1-219ENST00000491747 RDM1Q8NG50 284 aa10.46□□□□□ -0.74
BRCA1-219ENST00000491747 RNPC3Q96LT9 517 aaKnown RBP10.46□□□□□ -0.74
BRCA1-219ENST00000491747 FTOQ9C0B1 505 aaKnown RBP eCLIP10.46□□□□□ -0.74
BRCA1-219ENST00000491747 PCDHB6Q9Y5E3 794 aa10.46□□□□□ -0.74
BRCA1-219ENST00000491747 RSPH10B2B2RC85 870 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 MARCH6O60337 910 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 SLU7O95391 586 aaKnown RBP10.45□□□□□ -0.74
BRCA1-219ENST00000491747 CXCL10P02778 98 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 OATP04181 439 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 RSPH10BP0C881 870 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 RFC2P35250 354 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 TPM4P67936 248 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 MGAT3Q09327 533 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 NCAPH2Q6IBW4 605 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 PSRC1Q6PGN9 363 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-219ENST00000491747 SLFN12Q8IYM2 578 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 RPUSD2Q8IZ73 545 aaKnown RBP10.45□□□□□ -0.74
BRCA1-219ENST00000491747 CCDC150Q8NCX0 1101 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 HERVK_113Q902F9 699 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 SH2D3AQ9BRG2 576 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 TRMT1Q9NXH9 659 aaKnown RBP10.45□□□□□ -0.74
BRCA1-219ENST00000491747 RGL1Q9NZL6 768 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 PCDHA12Q9UN75 941 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 PCDHA2Q9Y5H9 948 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 COL1A2P08123 1366 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 MICAL3Q7RTP6 2002 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 A0A1W2PQ27 194 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 A0A1W2PQ64 194 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 A0A1W2PQD8 194 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 GRXCR1A8MXD5 290 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 C22orf31O95567 290 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 TUBB4AP04350 444 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 ZNF484Q5JVG2 852 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 FAM26DQ5JW98 314 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 RPAINQ86UA6 219 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 FMR1NBQ8N0W7 255 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-219ENST00000491747 DYDC2Q96IM9 177 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 CEP89Q96ST8 783 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 BPIFA3Q9BQP9 254 aa10.45□□□□□ -0.74
BRCA1-219ENST00000491747 FAM49AQ9H0Q0 323 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-219ENST00000491747 ZBTB39O15060 712 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 KCNJ6P48051 423 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 TMEM62Q0P6H9 643 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 EPHA7Q15375 998 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
BRCA1-219ENST00000491747 TARBP2Q15633 366 aaKnown RBP10.44□□□□□ -0.74
BRCA1-219ENST00000491747 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
BRCA1-219ENST00000491747 KCNG4Q8TDN1 519 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-219ENST00000491747 SMIM35A0A1B0GVV1 85 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 POTEMA6NI47 508 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 CAND2O75155 1236 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 TRAPPC10P48553 1259 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 PSMC5P62195 406 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 CTTNQ14247 550 aaKnown RBP10.44□□□□□ -0.74
BRCA1-219ENST00000491747 TAF2Q6P1X5 1199 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 ANO5Q75V66 913 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 KIAA0319LQ8IZA0 1049 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 NIFKQ9BYG3 293 aaKnown RBP10.44□□□□□ -0.74
BRCA1-219ENST00000491747 CDHR5Q9HBB8 845 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 NRBP2Q9NSY0 501 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 KIAA1468Q9P260 1216 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 PCDHA7Q9UN72 937 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 CDY2AQ9Y6F7 541 aa10.44□□□□□ -0.74
BRCA1-219ENST00000491747 SLITRK3O94933 977 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 P4HBP07237 508 aaKnown RBP10.43□□□□□ -0.74
BRCA1-219ENST00000491747 PFKMP08237 780 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 OR52Z1P0C646 297 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 SFPQP23246 707 aaKnown RBP eCLIP10.43□□□□□ -0.74
BRCA1-219ENST00000491747 TECP42680 631 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 QARSP47897 775 aaKnown RBP10.43□□□□□ -0.74
BRCA1-219ENST00000491747 CYP4A11Q02928 519 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 IL17AQ16552 155 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 PLA2G4FQ68DD2 849 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 LINC01465Q8N7H1 131 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 FAM167AQ96KS9 214 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 EIF2AK1Q9BQI3 630 aaKnown RBP10.43□□□□□ -0.74
BRCA1-219ENST00000491747 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
BRCA1-219ENST00000491747 SEPT9Q9UHD8 586 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-219ENST00000491747 A0A087WWV3 80 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 SMC2O95347 1197 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 YEATS4O95619 227 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 MRPS6P82932 125 aaKnown RBP10.43□□□□□ -0.74
BRCA1-219ENST00000491747 PTGDRQ13258 359 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 ORC2Q13416 577 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-219ENST00000491747 STK38Q15208 465 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 ELF2Q15723 593 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 MTERF2Q49AM1 385 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 PLEKHG4Q58EX7 1191 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 XKR3Q5GH77 459 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 LRRC71Q8N4P6 559 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms