RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 KIAA1841Q6NSI8 718 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 MRPL43Q8N983 215 aaKnown RBP12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 SUMF1Q8NBK3 374 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 DBR1Q9UK59 544 aaKnown RBP12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 ZMIZ1Q9ULJ6 1067 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 HCFC2Q9Y5Z7 792 aa12.71□□□□□ -0.37
CLCNKA-206ENST00000491433 EVPLQ92817 2033 aa12.71□□□□□ -0.38
CLCNKA-206ENST00000491433 ATG7O95352 703 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 SHC2P98077 582 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 PLEKHM2Q8IWE5 1019 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 TRAPPC12Q8WVT3 735 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 ZBTB10Q96DT7 871 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 MXRA8Q9BRK3 442 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 MRPL9Q9BYD2 267 aaKnown RBP12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 KCNH7Q9NS40 1196 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 LIMD1Q9UGP4 676 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 PCDHA6Q9UN73 950 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 PCDHA8Q9Y5H6 950 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 BPTFQ12830 3046 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 FRYQ5TBA9 3013 aa12.7□□□□□ -0.38
CLCNKA-206ENST00000491433 HELZ2Q9BYK8 2649 aaKnown RBP12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 C2orf71A6NGG8 1288 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 KINO60870 393 aaKnown RBP12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 EOMESO95936 686 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 FGFR1P11362 822 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 CA8P35219 290 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 OTOP3Q7RTS5 596 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 PPFIBP1Q86W92 1011 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 KIAA0319LQ8IZA0 1049 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 TMTC2Q8N394 836 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 RUFY2Q8WXA3 655 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 CASD1Q96PB1 797 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 STK39Q9UEW8 545 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
CLCNKA-206ENST00000491433 BACH1O14867 736 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 CLASP2O75122 1294 aaKnown RBP12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 FOSP01100 380 aaPredicted RBP12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 ASGR2P07307 311 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 CALM1P0DP23 149 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 CALM2P0DP24 149 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 CALM3P0DP25 149 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 ALDH7A1P49419 539 aaKnown RBP12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 TDGQ13569 410 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 DSC3Q14574 896 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 RARS2Q5T160 578 aaKnown RBP12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 FAM228AQ86W67 206 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 CHD1LQ86WJ1 897 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 TMEM40Q8WWA1 233 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 RIN2Q8WYP3 895 aaPredicted RBP12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 SMOC2Q9H3U7 446 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 FBXL21Q9UKT6 434 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 USP18Q9UMW8 372 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 CEP131Q9UPN4 1083 aa12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 MYH9P35579 1960 aaKnown RBP12.68□□□□□ -0.38
CLCNKA-206ENST00000491433 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 CXCL14O95715 111 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 CYP21A2P08686 494 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 TMOD1P28289 359 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 PMLP29590 882 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 POLGP54098 1239 aaPredicted RBP12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 NONOQ15233 471 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 KIZQ2M2Z5 673 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 CEP55Q53EZ4 464 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 MIS18BP1Q6P0N0 1132 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 PDXDC2PQ6P474 469 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 CCDC149Q6ZUS6 474 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 LURAP1LQ8IV03 231 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 SMC5Q8IY18 1101 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 SLC39A11Q8N1S5 342 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 IGDCC4Q8TDY8 1250 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 OSMRQ99650 979 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 CDHR5Q9HBB8 845 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 ZNF302Q9NR11 478 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 IGSF9Q9P2J2 1179 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 DUSP12Q9UNI6 340 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 IRAK3Q9Y616 596 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 DENND4AQ7Z401 1863 aa12.67□□□□□ -0.38
CLCNKA-206ENST00000491433 E7EWF7 191 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 MAGEB2O15479 319 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 SP9P0CG40 484 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 NPR3P17342 541 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 KCNA4P22459 653 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 RFX1P22670 979 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 UBE2SQ16763 222 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 ABHD15Q6UXT9 468 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 LRRC55Q6ZSA7 311 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 CABP7Q86V35 215 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 ECHDC2Q86YB7 292 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 BORCS6Q96GS4 357 aa12.66□□□□□ -0.38
CLCNKA-206ENST00000491433 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms