RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 LINC01465Q8N7H1 131 aa15.25■□□□□ 0.03
TRAIP-211ENST00000491060 RDM1Q8NG50 284 aa15.25■□□□□ 0.03
TRAIP-211ENST00000491060 TMEM60Q9H2L4 133 aa15.25■□□□□ 0.03
TRAIP-211ENST00000491060 PCDHGC5Q9Y5F6 944 aa15.25■□□□□ 0.03
TRAIP-211ENST00000491060 REV3LO60673 3130 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 POTEMA6NI47 508 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 H3BNC9 293 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 ZSCAN20P17040 1043 aaPredicted RBP15.24■□□□□ 0.03
TRAIP-211ENST00000491060 BMPR1AP36894 532 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 TARBP2Q15633 366 aaKnown RBP15.24■□□□□ 0.03
TRAIP-211ENST00000491060 CLUL1Q15846 466 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 PTPROQ16827 1216 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 MAEAQ7L5Y9 396 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 ATXN2LQ8WWM7 1075 aaKnown RBP15.24■□□□□ 0.03
TRAIP-211ENST00000491060 HLA-CQ95604 372 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 ZNF689Q96CS4 500 aaPredicted RBP15.24■□□□□ 0.03
TRAIP-211ENST00000491060 FAM20AQ96MK3 541 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 NAP1L4Q99733 375 aaKnown RBP15.24■□□□□ 0.03
TRAIP-211ENST00000491060 NIFKQ9BYG3 293 aaKnown RBP15.24■□□□□ 0.03
TRAIP-211ENST00000491060 CYP26B1Q9NR63 512 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 RGS18Q9NS28 235 aa15.24■□□□□ 0.03
TRAIP-211ENST00000491060 H3BQ06 376 aaPredicted RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 CD2BP2O95400 341 aaKnown RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 SRGAP2CP0DJJ0 459 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 KCNA5P22460 613 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 GTF2F1P35269 517 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 PBX3P40426 434 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 DNM2P50570 870 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 EPHA7Q15375 998 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 SLFN12Q8IYM2 578 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 LPPQ93052 612 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 MRPL38Q96DV4 380 aaKnown RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 ZSCAN31Q96LW9 406 aaPredicted RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 CCDC43Q96MW1 224 aaKnown RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 EIF2AK1Q9BQI3 630 aaKnown RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 GCOM2Q9BZD3 368 aaPredicted RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 TTC12Q9H892 705 aaPredicted RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 RC3H2Q9HBD1 1191 aaKnown RBP15.23■□□□□ 0.03
TRAIP-211ENST00000491060 ATP6V0A4Q9HBG4 840 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 SQORQ9Y6N5 450 aa15.23■□□□□ 0.03
TRAIP-211ENST00000491060 C9IYK1 514 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 MAFO75444 373 aaPredicted RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 P4HBP07237 508 aaKnown RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 DARSP14868 501 aaKnown RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 POU3F3P20264 500 aaPredicted RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 EIF4BP23588 611 aaKnown RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 DNAJB1P25685 340 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 YWHABP31946 246 aaKnown RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 ODR4Q5SWX8 454 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 MCTP1Q6DN14 999 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 SLC24A5Q71RS6 500 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 CMTR2Q8IYT2 770 aaKnown RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 KLHL23Q8NBE8 558 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 HELQQ8TDG4 1101 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 PIGOQ8TEQ8 1089 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 SYMPKQ92797 1274 aaKnown RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 CEP89Q96ST8 783 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 UHRF1Q96T88 793 aaPredicted RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 C1orf112Q9NSG2 853 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 CLDND1Q9NY35 253 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 PCDHA12Q9UN75 941 aa15.22■□□□□ 0.03
TRAIP-211ENST00000491060 PIN4Q9Y237 131 aaKnown RBP15.22■□□□□ 0.03
TRAIP-211ENST00000491060 TBX3O15119 743 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 LINC00271P0C7V0 271 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 CA8P35219 290 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 IRS1P35568 1242 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 TECP42680 631 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 SPIRE1Q08AE8 756 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 DSC3Q14574 896 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 EMC2Q15006 297 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 CATSPER4Q7RTX7 472 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 RBM23Q86U06 439 aaKnown RBP15.21■□□□□ 0.03
TRAIP-211ENST00000491060 SLC7A3Q8WY07 619 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 C11orf84Q9BUA3 381 aaPredicted RBP15.21■□□□□ 0.03
TRAIP-211ENST00000491060 UBE2ZQ9H832 354 aaPredicted RBP15.21■□□□□ 0.03
TRAIP-211ENST00000491060 UPF2Q9HAU5 1272 aaKnown RBP15.21■□□□□ 0.03
TRAIP-211ENST00000491060 TYW1Q9NV66 732 aaKnown RBP15.21■□□□□ 0.03
TRAIP-211ENST00000491060 INPP5FQ9Y2H2 1132 aa15.21■□□□□ 0.03
TRAIP-211ENST00000491060 LINC01565O15544 149 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 SLITRK3O94933 977 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 ITGB1P05556 798 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 RABEP1Q15276 862 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 TTC38Q5R3I4 469 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 TWF2Q6IBS0 349 aaKnown RBP15.2■□□□□ 0.02
TRAIP-211ENST00000491060 ADGRD2Q7Z7M1 963 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 THNSL1Q8IYQ7 743 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 ABI1Q8IZP0 508 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 MICAL1Q8TDZ2 1067 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 PRPF31Q8WWY3 499 aaKnown RBP15.2■□□□□ 0.02
TRAIP-211ENST00000491060 LLPHQ9BRT6 129 aaKnown RBP15.2■□□□□ 0.02
TRAIP-211ENST00000491060 NSUN3Q9H649 340 aaKnown RBP15.2■□□□□ 0.02
TRAIP-211ENST00000491060 ZSWIM4Q9H7M6 989 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 POLD4Q9HCU8 107 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 SH2B1Q9NRF2 756 aaPredicted RBP15.2■□□□□ 0.02
TRAIP-211ENST00000491060 COL4A3BPQ9Y5P4 624 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 TRANK1O15050 2925 aa15.2■□□□□ 0.02
TRAIP-211ENST00000491060 BRWD1Q9NSI6 2320 aa15.19■□□□□ 0.02
TRAIP-211ENST00000491060 ST18O60284 1047 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms