RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 RNPEPL1Q9HAU8 725 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 TMOD4Q9NZQ9 345 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 JCADQ9P266 1359 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 LIN9Q5TKA1 542 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 C1orf146Q5VVC0 180 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 FAM186BQ8IYM0 893 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 DDX25Q9UHL0 483 aaKnown RBP12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 BCAP29Q9UHQ4 241 aa12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
CRNKL1-204ENST00000490910 KCNMA1Q12791 1236 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 MIER3Q7Z3K6 550 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 CTAGE3PQ8IX95 158 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 ZNF653Q96CK0 615 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 PGM2Q96G03 612 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 PACSIN1Q9BY11 444 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 CAPN9O14815 690 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 PHF2O75151 1096 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 ARFIP2P53365 341 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 DYNLL1P63167 89 aaKnown RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 CAV1Q03135 178 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 PTK2Q05397 1052 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 CWF19L1Q69YN2 538 aaKnown RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 GLYCTKQ8IVS8 523 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 SLF2Q8IX21 1173 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 SRBD1Q8N5C6 995 aaKnown RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 RBBP8NLQ8NC74 664 aaPredicted RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 FAXDC2Q96IV6 333 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 CLIC2O15247 247 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 RNF8O76064 485 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 ZCCHC18P0CG32 403 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 PGM1P36871 562 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 GALCP54803 685 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 COASYQ13057 564 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 OLFML2BQ68BL8 750 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 ZNF513Q8N8E2 541 aaPredicted RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 TPCN2Q8NHX9 752 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 FAM81AQ8TBF8 368 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 RPS6KC1Q96S38 1066 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 CARD9Q9H257 536 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 FAM217BQ9NTX9 383 aaPredicted RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 FAM47DPA6NHR8 397 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 PLS3P13797 630 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 IFI35P80217 286 aaPredicted RBP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 LMNB2Q03252 620 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 MED21Q13503 144 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 RNF207Q6ZRF8 634 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 RASSF3Q86WH2 238 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 DNAJC10Q8IXB1 793 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 CCDC89Q8N998 374 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 MAML1Q92585 1016 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 AGTPBP1Q9UPW5 1226 aa12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
CRNKL1-204ENST00000490910 KLHL33A6NCF5 533 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 TRPA1O75762 1119 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 TTLL1O95922 423 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 ITGA4P13612 1032 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 COPB2P35606 906 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 PSMC2P35998 433 aaKnown RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 ATXN2LQ8WWM7 1075 aaKnown RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 BSDC1Q9NW68 430 aaPredicted RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 PPARGC1AQ9UBK2 798 aaKnown RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 CEP170BQ9Y4F5 1589 aaPredicted RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 PCDH11YQ9BZA8 1340 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 ATP9AO75110 1047 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 LDHBP07195 334 aaKnown RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 RFC1P35251 1148 aaPredicted RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 ERFP50548 548 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 DNAJC3Q13217 504 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 TRADDQ15628 312 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 CCDC92Q53HC0 331 aaPredicted RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 RAD54LQ92698 747 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 SERPINB12Q96P63 405 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 MED15Q96RN5 788 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 DUSP9Q99956 384 aaKnown RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 EPB41L4AQ9HCS5 686 aaPredicted RBP12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 ARHGAP10A1A4S6 786 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 POTEMA6NI47 508 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 GGPS1O95749 300 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 ANXA13P27216 316 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 GYG1P46976 350 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 NCALDP61601 193 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 MYL7Q01449 175 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 MAPK7Q13164 816 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 PDIA6Q15084 440 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 DAB2IPQ5VWQ8 1189 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 SAYSD1Q9NPB0 183 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 KCNG1Q9UIX4 513 aa12.1□□□□□ -0.47
CRNKL1-204ENST00000490910 DNAJC12Q9UKB3 198 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms