RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 SLC24A5Q71RS6 500 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 ZNF410Q86VK4 478 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 TMEM192Q8IY95 271 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 ZNF579Q8NAF0 562 aaKnown RBP17.02■□□□□ 0.32
COL27A1-206ENST00000490831 FBXO22Q8NEZ5 403 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 SLC7A3Q8WY07 619 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 CEP170P1Q96L14 293 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 ADAM2Q99965 735 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
COL27A1-206ENST00000490831 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.32
COL27A1-206ENST00000490831 MTUS1Q9ULD2 1270 aa17.02■□□□□ 0.32
COL27A1-206ENST00000490831 REV3LO60673 3130 aa17.02■□□□□ 0.31
COL27A1-206ENST00000490831 RALGAPA2Q2PPJ7 1873 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 C5orf67F2Z3F1 127 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 GAS2O43903 313 aaKnown RBP17.01■□□□□ 0.31
COL27A1-206ENST00000490831 OR52Z1P0C646 297 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 ATP2B1P20020 1258 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 CYP4A11Q02928 519 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 TTC38Q5R3I4 469 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 TPH2Q8IWU9 490 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 CMTR2Q8IYT2 770 aaKnown RBP17.01■□□□□ 0.31
COL27A1-206ENST00000490831 FIBCD1Q8N539 461 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 C4orf32Q8N8J7 132 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 ELAC1Q9H777 363 aaKnown RBP17.01■□□□□ 0.31
COL27A1-206ENST00000490831 ANKEF1Q9NU02 776 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
COL27A1-206ENST00000490831 RWDD3Q9Y3V2 267 aa17.01■□□□□ 0.31
COL27A1-206ENST00000490831 DENND3A2RUS2 1198 aa17■□□□□ 0.31
COL27A1-206ENST00000490831 POTEMA6NI47 508 aa17■□□□□ 0.31
COL27A1-206ENST00000490831 H3BNC9 293 aa17■□□□□ 0.31
COL27A1-206ENST00000490831 ZBTB39O15060 712 aa17■□□□□ 0.31
COL27A1-206ENST00000490831 RB1P06400 928 aa17■□□□□ 0.31
COL27A1-206ENST00000490831 XRCC6P12956 609 aaKnown RBP eCLIP17■□□□□ 0.31
COL27A1-206ENST00000490831 TOB1P50616 345 aaPredicted RBP17■□□□□ 0.31
COL27A1-206ENST00000490831 GNL2Q13823 731 aaKnown RBP17■□□□□ 0.31
COL27A1-206ENST00000490831 ZNF174Q15697 407 aa17■□□□□ 0.31
COL27A1-206ENST00000490831 NLRC5Q86WI3 1866 aa17■□□□□ 0.31
COL27A1-206ENST00000490831 NLRP7Q8WX94 980 aa17■□□□□ 0.31
COL27A1-206ENST00000490831 GCOM2Q9BZD3 368 aaPredicted RBP17■□□□□ 0.31
COL27A1-206ENST00000490831 ARID2Q68CP9 1835 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 SPATA31C1P0DKV0 1188 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 GJB2P29033 226 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 BMPR1AP36894 532 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 POLGP54098 1239 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-206ENST00000490831 BTG3Q14201 252 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-206ENST00000490831 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-206ENST00000490831 XKR9Q5GH70 373 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 PPM1EQ8WY54 764 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 ZNF668Q96K58 619 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-206ENST00000490831 SCLT1Q96NL6 688 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 POLR3CQ9BUI4 534 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-206ENST00000490831 INO80BQ9C086 356 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-206ENST00000490831 IFT122Q9HBG6 1241 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 TUFT1Q9NNX1 390 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 PRDM6Q9NQX0 595 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 TMEM161AQ9NX61 479 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 PCDHB7Q9Y5E2 793 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 COL4A3BPQ9Y5P4 624 aa16.99■□□□□ 0.31
COL27A1-206ENST00000490831 A0A087WZ62 844 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL27A1-206ENST00000490831 CUL4AQ13619 759 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 EMC2Q15006 297 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 RHPN2Q8IUC4 686 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 TCP11Q8WWU5 503 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 PSPC1Q8WXF1 523 aaKnown RBP16.98■□□□□ 0.31
COL27A1-206ENST00000490831 MRPL38Q96DV4 380 aaKnown RBP16.98■□□□□ 0.31
COL27A1-206ENST00000490831 FDXACB1Q9BRP7 624 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-206ENST00000490831 TRAIPQ9BWF2 469 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 PLVAPQ9BX97 442 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 XPNPEP1Q9NQW7 623 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 CHST12Q9NRB3 414 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 LRFN2Q9ULH4 789 aa16.98■□□□□ 0.31
COL27A1-206ENST00000490831 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-206ENST00000490831 ASAP2O43150 1006 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 ZSCAN20P17040 1043 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-206ENST00000490831 MUTP22033 750 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL27A1-206ENST00000490831 RPA1P27694 616 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 TECP42680 631 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 RARRES1P49788 294 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 GPM6BQ13491 265 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 NBR1Q14596 966 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 CATSPER3Q86XQ3 398 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 KSR1Q8IVT5 923 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 MICALL1Q8N3F8 863 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 ATXN2LQ8WWM7 1075 aaKnown RBP16.97■□□□□ 0.31
COL27A1-206ENST00000490831 PRPF31Q8WWY3 499 aaKnown RBP16.97■□□□□ 0.31
COL27A1-206ENST00000490831 TMEM143Q96AN5 459 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 C11orf84Q9BUA3 381 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-206ENST00000490831 THEGQ9P2T0 379 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 SMC3Q9UQE7 1217 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 PCDHB6Q9Y5E3 794 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 MRPL42Q9Y6G3 142 aaKnown RBP16.97■□□□□ 0.31
COL27A1-206ENST00000490831 VCANP13611 3396 aa16.97■□□□□ 0.31
COL27A1-206ENST00000490831 A0A0U1RQF3 1178 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 LAD1O00515 517 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 MED24O75448 989 aa16.96■□□□□ 0.31
COL27A1-206ENST00000490831 CSDE1O75534 798 aaKnown RBP16.96■□□□□ 0.31
COL27A1-206ENST00000490831 DGAT1O75907 488 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms