RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TRMT1LQ7Z2T5 733 aaKnown RBP8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 RTN4RL1Q86UN2 441 aaPredicted RBP8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 GIMAP8Q8ND71 665 aaPredicted RBP8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 GLG1Q92896 1179 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 ZMYND12Q9H0C1 365 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 SMARCAD1Q9H4L7 1026 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 AGO3Q9H9G7 860 aaKnown RBP8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 JPH1Q9HDC5 661 aaPredicted RBP8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 GJB4Q9NTQ9 266 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 SLC9A2Q9UBY0 812 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 DNMT3LQ9UJW3 386 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 MTUS1Q9ULD2 1270 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
PRPF4B-208ENST00000490653 NFASCO94856 1347 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 PIEZO1Q92508 2521 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 LINC01553A4QN01 128 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 KIF28PB7ZC32 967 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 MAFGO15525 162 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 GJB5O95377 273 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 NEFLP07196 543 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 CYP3A4P08684 503 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 GHRP10912 638 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 IFNAR1P17181 557 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 STAT5BP51692 787 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 RCAN1P53805 252 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 LPIN1Q14693 890 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 SWSAP1Q6NVH7 229 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 CCDC60Q8IWA6 550 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 MYOCDQ8IZQ8 938 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 CDHR1Q96JP9 859 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 FAM49AQ9H0Q0 323 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 EHMT1Q9H9B1 1298 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 SUGCTQ9HAC7 445 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 PDRG1Q9NUG6 133 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 ERAP1Q9NZ08 941 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 ZNF215Q9UL58 517 aaPredicted RBP8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 CDY2AQ9Y6F7 541 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 NID2Q14112 1375 aa8.32□□□□□ -1.08
PRPF4B-208ENST00000490653 NRCAMQ92823 1304 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 MUC6Q6W4X9 2439 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 LOXHD1Q8IVV2 1947 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 MICAL3Q7RTP6 2002 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 EVPLQ92817 2033 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 IGKV6D-21A0A0A0MT36 114 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 CCDC196A0A1B0GTZ2 297 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 ESYT2A0FGR8 921 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 MBLAC1A4D2B0 266 aaPredicted RBP8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 PI4K2BG5E9Z4 385 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 hCG_1984214I3L0E3 225 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 ENPP3O14638 875 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 GPR37L1O60883 481 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 PARNO95453 639 aaKnown RBP8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 CTDNEP1O95476 244 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 GNAT1P11488 350 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 KLRC1P26715 233 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 NLRP5P59047 1200 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 SSRP1Q08945 709 aaKnown RBP8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 SCRN1Q12765 414 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 AP3B2Q13367 1082 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 NPY5RQ15761 445 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 PRR16Q569H4 304 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 PLPPR4Q7Z2D5 763 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 ZNF713Q8N859 430 aaPredicted RBP8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 ARMC2Q8NEN0 867 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 GDPD5Q8WTR4 605 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 LINC01599Q8WXQ3 324 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 LENG9Q96B70 501 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 RAD9AQ99638 391 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 SDF4Q9BRK5 362 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 C17orf80Q9BSJ5 609 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 C1QTNF1Q9BXJ1 281 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 RNF26Q9BY78 433 aaPredicted RBP8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 TM6SF1Q9BZW5 370 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 C6orf50Q9HD87 102 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 TPCN1Q9ULQ1 816 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 KCNJ14Q9UNX9 436 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 CYP46A1Q9Y6A2 500 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 SIP14410 1827 aa8.31□□□□□ -1.08
PRPF4B-208ENST00000490653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 ZBTB42B2RXF5 422 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 M0R2N6 131 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 MSH4O15457 936 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 LARGE1O95461 756 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 FSHRP23945 695 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 CD52P31358 61 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 CIITAP33076 1130 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 ERVK-21P61565 698 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 HTRA4P83105 476 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 AKAP17AQ02040 695 aaKnown RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 TMEM266Q2M3C6 531 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 EARS2Q5JPH6 523 aaKnown RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 FBXO47Q5MNV8 452 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 MTHFD1LQ6UB35 978 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 NIPA1Q7RTP0 329 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 RPAINQ86UA6 219 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 REXO1Q8N1G1 1221 aaKnown RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 NECAB1Q8N987 351 aa8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.3□□□□□ -1.08
PRPF4B-208ENST00000490653 SEPT8Q92599 483 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms