RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 EML1O00423 815 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 VTNP04004 478 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 TMOD1P28289 359 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 GPC3P51654 580 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 CLCN3P51790 818 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 NLRP11P59045 1033 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 CDC42EP1Q00587 391 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 TCEAL5Q5H9L2 206 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 EARS2Q5JPH6 523 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 MIER3Q7Z3K6 550 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 NEK8Q86SG6 692 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 METTL13Q8N6R0 699 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 SPPL3Q8TCT6 385 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 GTF3C6Q969F1 213 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 NECAB3Q96P71 396 aaPredicted RBP10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 OSMRQ99650 979 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 NSUN3Q9H649 340 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 TCF20Q9UGU0 1960 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 RALGAPA2Q2PPJ7 1873 aa10.95□□□□□ -0.66
TMEM39A-210ENST00000490099 NCK2O43639 380 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 LARGE1O95461 756 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 MMP1P03956 469 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 DARSP14868 501 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 XBP1P17861 261 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 CTNNB1P35222 781 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 LTBRP36941 435 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 PSMC5P62195 406 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 SPIRE1Q08AE8 756 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 ST3GAL1Q11201 340 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 DRP2Q13474 957 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 ANO5Q75V66 913 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 NECAB1Q8N987 351 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 NSUN7Q8NE18 718 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 WASF1Q92558 559 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 PABPC5Q96DU9 382 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 NAP1L4Q99733 375 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 TRAIPQ9BWF2 469 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 RNF19AQ9NV58 838 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 TMEM161AQ9NX61 479 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 GINS2Q9Y248 185 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 PCDHB7Q9Y5E2 793 aa10.94□□□□□ -0.66
TMEM39A-210ENST00000490099 CCDC194A0A1B0GVG4 234 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 CHMP2AO43633 222 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 DTNBO60941 627 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 MAFO75444 373 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 ITGB1P05556 798 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 DNAJB1P25685 340 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 QARSP47897 775 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 GATMP50440 423 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 NEK4P51957 841 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 TBC1D8BQ0IIM8 1120 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 EPHA7Q15375 998 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 LETM2Q2VYF4 491 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 FAM102BQ5T8I3 360 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 PIK3AP1Q6ZUJ8 805 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 TRMT1LQ7Z2T5 733 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 LRRC71Q8N4P6 559 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 MAP7D2Q96T17 732 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 KIF2CQ99661 725 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 WRAP73Q9P2S5 460 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 PPME1Q9Y570 386 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 XIRP2A4UGR9 3374 aa10.93□□□□□ -0.66
TMEM39A-210ENST00000490099 A0A0U1RQF3 1178 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 DENND3A2RUS2 1198 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 TMEM150BA6NC51 233 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 FAM205CA6NFA0 338 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 P4HBP07237 508 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 KCNA5P22460 613 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 UBE3AQ05086 875 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 HYAL1Q12794 435 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 NR5A1Q13285 461 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 PUS10Q3MIT2 529 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 FAM178BQ8IXR5 827 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 C4orf19Q8IY42 314 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 KLHL23Q8NBE8 558 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 IL27Q8NEV9 243 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 MTMR9Q96QG7 549 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 HSD17B14Q9BPX1 270 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 DHX33Q9H6R0 707 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 CD320Q9NPF0 282 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 CYP26B1Q9NR63 512 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 CHST12Q9NRB3 414 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 AKT3Q9Y243 479 aa10.92□□□□□ -0.66
TMEM39A-210ENST00000490099 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 BTBD18B2RXH4 712 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 CCNT1O60563 726 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 JAK2O60674 1132 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 DKC1O60832 514 aaKnown RBP eCLIP10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 ZNF623O75123 536 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 LYPLA2O95372 231 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 EOMESO95936 686 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 ATF7P17544 494 aaPredicted RBP10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 KRT2P35908 639 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 ADAM15Q13444 863 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms